Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1788

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
2,234,744	+		BT1787	0.20	-0.7
2,234,749	+		BT1787	0.21	+0.3
2,234,860	+		BT1787	0.31	-0.6
2,234,860	+		BT1787	0.31	-2.5
2,234,865	+		BT1787	0.31	-1.0
2,234,866	-		BT1787	0.31	+0.3
2,234,868	-		BT1787	0.32	+0.2
2,234,886	+		BT1787	0.33	+0.0
2,234,887	-		BT1787	0.33	+2.0
2,234,887	-		BT1787	0.33	-0.2
2,234,887	-		BT1787	0.33	-1.4
2,234,906	+		BT1787	0.35	+0.1
2,234,907	-		BT1787	0.35	-0.6
2,234,907	-		BT1787	0.35	+0.3
2,235,014	+		BT1787	0.45	+0.6
2,235,020	+		BT1787	0.45	-0.1
2,235,025	-		BT1787	0.46	-0.3
2,235,041	-		BT1787	0.47	+0.4
2,235,050	-		BT1787	0.48	+0.2
2,235,176	+		BT1787	0.60	-1.4
2,235,177	-		BT1787	0.60	-0.3
2,235,277	+		BT1787	0.69	-1.6
2,235,277	+		BT1787	0.69	-1.9
2,235,278	-		BT1787	0.69	-1.1
2,235,329	-		BT1787	0.73	+1.0
2,235,366	-		BT1787	0.77	+0.3
2,235,366	-		BT1787	0.77	+1.5
2,235,420	-		BT1787	0.82	+1.6
2,235,535	+				+0.4
2,235,567	-				+0.5
2,235,569	+				-0.2
2,235,570	-				-0.5
2,235,578	-				+0.2
2,235,588	+				-0.0
2,235,588	+				+1.1
2,235,618	-				-2.0
2,235,652	+		BT1788	0.12	-0.0
2,235,661	+		BT1788	0.14	-1.5
2,235,661	+		BT1788	0.14	-2.8
2,235,779	+		BT1788	0.49	-0.7
2,235,780	-		BT1788	0.49	-1.6
2,235,785	+		BT1788	0.51	-1.4
2,235,815	+		BT1788	0.59	-1.5
2,235,904	-		BT1788	0.85	-0.6
2,235,911	+		BT1788	0.87	-1.3
2,235,982	-				+0.3
2,236,006	-				-0.7
2,236,011	-				-0.9
2,236,024	+				-1.3
2,236,144	+				+0.3
2,236,145	-				+0.6
2,236,162	-				-1.3
2,236,247	-				-1.2
2,236,252	+		BT1789	0.10	-2.0
2,236,253	-		BT1789	0.10	-3.0
2,236,320	+		BT1789	0.16	+0.9
2,236,320	+		BT1789	0.16	+0.5
2,236,323	+		BT1789	0.16	+0.4
2,236,324	-		BT1789	0.16	-0.5
2,236,343	+		BT1789	0.18	-2.2
2,236,343	+		BT1789	0.18	-1.2
2,236,400	+		BT1789	0.23	-0.6
2,236,404	+		BT1789	0.23	+1.3
2,236,404	+		BT1789	0.23	-0.6
2,236,405	-		BT1789	0.23	-0.4
2,236,405	-		BT1789	0.23	-2.0
2,236,410	-		BT1789	0.23	+0.2
2,236,410	-		BT1789	0.23	-1.3
2,236,460	+		BT1789	0.28	-1.3
2,236,461	-		BT1789	0.28	+0.7
2,236,461	-		BT1789	0.28	-0.0
2,236,461	-		BT1789	0.28	-2.0
2,236,461	-		BT1789	0.28	-0.5
2,236,465	+		BT1789	0.28	-0.3
2,236,515	-		BT1789	0.32	-1.7
2,236,515	-		BT1789	0.32	+0.1
2,236,522	+		BT1789	0.33	-0.2
2,236,522	+		BT1789	0.33	-1.5
2,236,522	+		BT1789	0.33	-1.9
2,236,565	+		BT1789	0.36	+1.1
2,236,565	+		BT1789	0.36	+0.1
2,236,589	-		BT1789	0.38	-0.5
2,236,637	+		BT1789	0.43	-0.3
2,236,637	+		BT1789	0.43	+2.1
2,236,638	-		BT1789	0.43	+0.3
2,236,692	-		BT1789	0.47	-1.1
2,236,692	-		BT1789	0.47	-0.6
2,236,740	-		BT1789	0.51	+0.0
2,236,740	-		BT1789	0.51	-0.2
2,236,760	-		BT1789	0.53	-0.1
2,236,776	-		BT1789	0.54	+1.5
2,236,827	-		BT1789	0.59	-2.4
2,236,884	-		BT1789	0.63	-2.2
2,236,884	-		BT1789	0.63	+0.1
2,236,885	+		BT1789	0.63	+1.3
2,236,885	+		BT1789	0.63	-0.7
2,236,945	-		BT1789	0.69	-0.5