Experiment: BHIS with Fusidic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0158 and BT0159 are separated by 94 nucleotides BT0159 and BT0160 are separated by 121 nucleotides BT0160 and BT0161 are separated by 47 nucleotides
BT0158: BT0158 - Na(+)/H(+) antiporter (NCBI ptt file), at 163,152 to 164,579
BT0158
BT0159: BT0159 - conserved hypothetical protein (NCBI ptt file), at 164,674 to 165,546
BT0159
BT0160: BT0160 - hypothetical protein (NCBI ptt file), at 165,668 to 166,102
BT0160
BT0161: BT0161 - putative permease (NCBI ptt file), at 166,150 to 167,325
BT0161
Position (kb) 164
165
166 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 163.692 kb on + strand, within BT0158 at 163.776 kb on + strand, within BT0158 at 163.847 kb on + strand, within BT0158 at 163.847 kb on + strand, within BT0158 at 163.949 kb on + strand, within BT0158 at 163.988 kb on + strand, within BT0158 at 163.989 kb on - strand, within BT0158 at 164.000 kb on - strand, within BT0158 at 164.276 kb on - strand, within BT0158 at 164.427 kb on + strand, within BT0158 at 164.533 kb on - strand at 164.582 kb on + strand at 164.588 kb on + strand at 164.627 kb on - strand at 164.634 kb on - strand at 164.701 kb on + strand at 164.830 kb on - strand, within BT0159 at 164.861 kb on - strand, within BT0159 at 164.934 kb on - strand, within BT0159 at 164.936 kb on - strand, within BT0159 at 164.982 kb on + strand, within BT0159 at 164.983 kb on - strand, within BT0159 at 165.050 kb on - strand, within BT0159 at 165.100 kb on - strand, within BT0159 at 165.230 kb on - strand, within BT0159 at 165.232 kb on - strand, within BT0159 at 165.252 kb on + strand, within BT0159 at 165.310 kb on + strand, within BT0159 at 165.345 kb on + strand, within BT0159 at 165.476 kb on - strand at 165.526 kb on - strand at 165.580 kb on - strand at 165.654 kb on + strand at 165.766 kb on + strand, within BT0160 at 165.766 kb on + strand, within BT0160 at 165.812 kb on - strand, within BT0160 at 165.904 kb on + strand, within BT0160 at 166.121 kb on + strand at 166.174 kb on + strand at 166.374 kb on + strand, within BT0161 at 166.379 kb on - strand, within BT0161 at 166.508 kb on + strand, within BT0161
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Fusidic 0.004 mg/ml remove 163,692 + BT0158 0.38 +1.7 163,776 + BT0158 0.44 +1.2 163,847 + BT0158 0.49 -1.1 163,847 + BT0158 0.49 -0.8 163,949 + BT0158 0.56 -1.1 163,988 + BT0158 0.59 +2.8 163,989 - BT0158 0.59 -1.3 164,000 - BT0158 0.59 -3.1 164,276 - BT0158 0.79 +0.2 164,427 + BT0158 0.89 +0.4 164,533 - +1.8 164,582 + -4.1 164,588 + -0.7 164,627 - -0.1 164,634 - -0.5 164,701 + +1.2 164,830 - BT0159 0.18 -0.9 164,861 - BT0159 0.21 -2.0 164,934 - BT0159 0.30 -2.1 164,936 - BT0159 0.30 +0.6 164,982 + BT0159 0.35 -1.8 164,983 - BT0159 0.35 -1.1 165,050 - BT0159 0.43 -2.9 165,100 - BT0159 0.49 +1.2 165,230 - BT0159 0.64 -2.7 165,232 - BT0159 0.64 -0.4 165,252 + BT0159 0.66 -2.3 165,310 + BT0159 0.73 -1.2 165,345 + BT0159 0.77 -0.4 165,476 - +0.2 165,526 - -2.0 165,580 - -1.0 165,654 + +0.5 165,766 + BT0160 0.23 -1.1 165,766 + BT0160 0.23 -1.8 165,812 - BT0160 0.33 +0.4 165,904 + BT0160 0.54 -1.4 166,121 + +0.8 166,174 + -1.4 166,374 + BT0161 0.19 -0.4 166,379 - BT0161 0.19 -1.1 166,508 + BT0161 0.30 -0.6
Or see this region's nucleotide sequence