Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4284 and Psyr_4285 overlap by 4 nucleotides Psyr_4285 and Psyr_4286 are separated by 265 nucleotides Psyr_4286 and Psyr_4287 overlap by 4 nucleotides
Psyr_4284: Psyr_4284 - Molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal, at 5,109,718 to 5,110,707
_4284
Psyr_4285: Psyr_4285 - Ferredoxin:[2Fe-2S]-binding protein, at 5,110,704 to 5,111,234
_4285
Psyr_4286: Psyr_4286 - Xanthine/uracil/vitamin C permease, at 5,111,500 to 5,112,795
_4286
Psyr_4287: Psyr_4287 - tRNA (uracil-5-)-methyltransferase, at 5,112,792 to 5,113,877
_4287
Position (kb) 5111
5112
5113 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5110.691 kb on + strand at 5110.691 kb on + strand at 5110.691 kb on + strand at 5110.691 kb on + strand at 5110.692 kb on - strand at 5110.692 kb on - strand at 5110.692 kb on - strand at 5110.696 kb on - strand at 5110.696 kb on - strand at 5110.775 kb on + strand, within Psyr_4285 at 5110.775 kb on + strand, within Psyr_4285 at 5110.776 kb on - strand, within Psyr_4285 at 5110.784 kb on - strand, within Psyr_4285 at 5111.049 kb on + strand, within Psyr_4285 at 5111.261 kb on - strand at 5111.272 kb on + strand at 5111.272 kb on + strand at 5111.333 kb on + strand at 5111.333 kb on + strand at 5111.333 kb on + strand at 5111.333 kb on + strand at 5111.333 kb on + strand at 5111.333 kb on + strand at 5111.333 kb on + strand at 5111.334 kb on - strand at 5111.334 kb on - strand at 5111.334 kb on - strand at 5111.334 kb on - strand at 5111.387 kb on + strand at 5111.387 kb on + strand at 5111.388 kb on - strand at 5111.388 kb on - strand at 5111.388 kb on - strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.590 kb on + strand at 5111.591 kb on - strand at 5111.591 kb on - strand at 5111.591 kb on - strand at 5111.591 kb on - strand at 5111.591 kb on - strand at 5111.591 kb on - strand at 5111.591 kb on - strand at 5111.754 kb on + strand, within Psyr_4286 at 5111.754 kb on + strand, within Psyr_4286 at 5111.754 kb on + strand, within Psyr_4286 at 5111.755 kb on - strand, within Psyr_4286 at 5111.758 kb on + strand, within Psyr_4286 at 5111.758 kb on + strand, within Psyr_4286 at 5111.758 kb on + strand, within Psyr_4286 at 5111.759 kb on - strand, within Psyr_4286 at 5111.759 kb on - strand, within Psyr_4286 at 5111.759 kb on - strand, within Psyr_4286 at 5111.759 kb on - strand, within Psyr_4286 at 5111.759 kb on - strand, within Psyr_4286 at 5111.795 kb on + strand, within Psyr_4286 at 5111.875 kb on - strand, within Psyr_4286 at 5111.875 kb on - strand, within Psyr_4286 at 5111.875 kb on - strand, within Psyr_4286 at 5111.955 kb on + strand, within Psyr_4286 at 5112.058 kb on + strand, within Psyr_4286 at 5112.058 kb on + strand, within Psyr_4286 at 5112.059 kb on - strand, within Psyr_4286 at 5112.357 kb on + strand, within Psyr_4286 at 5112.358 kb on - strand, within Psyr_4286 at 5112.358 kb on - strand, within Psyr_4286 at 5112.406 kb on + strand, within Psyr_4286 at 5112.406 kb on + strand, within Psyr_4286 at 5112.406 kb on + strand, within Psyr_4286 at 5112.407 kb on - strand, within Psyr_4286 at 5112.620 kb on + strand, within Psyr_4286 at 5112.621 kb on - strand, within Psyr_4286 at 5112.653 kb on - strand, within Psyr_4286 at 5112.653 kb on - strand, within Psyr_4286 at 5112.653 kb on - strand, within Psyr_4286 at 5112.653 kb on - strand, within Psyr_4286 at 5112.653 kb on - strand, within Psyr_4286 at 5112.820 kb on - strand at 5112.820 kb on - strand at 5112.918 kb on + strand, within Psyr_4287 at 5112.918 kb on + strand, within Psyr_4287 at 5112.918 kb on + strand, within Psyr_4287 at 5112.919 kb on - strand, within Psyr_4287 at 5112.919 kb on - strand, within Psyr_4287 at 5112.919 kb on - strand, within Psyr_4287 at 5112.920 kb on + strand, within Psyr_4287 at 5112.920 kb on + strand, within Psyr_4287 at 5112.920 kb on + strand, within Psyr_4287 at 5112.920 kb on + strand, within Psyr_4287 at 5112.920 kb on + strand, within Psyr_4287 at 5112.920 kb on + strand, within Psyr_4287 at 5112.921 kb on - strand, within Psyr_4287 at 5112.921 kb on - strand, within Psyr_4287 at 5112.921 kb on - strand, within Psyr_4287 at 5112.921 kb on - strand, within Psyr_4287 at 5112.970 kb on - strand, within Psyr_4287 at 5112.970 kb on - strand, within Psyr_4287 at 5113.041 kb on - strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.275 kb on + strand, within Psyr_4287 at 5113.276 kb on - strand, within Psyr_4287 at 5113.276 kb on - strand, within Psyr_4287 at 5113.276 kb on - strand, within Psyr_4287 at 5113.276 kb on - strand, within Psyr_4287 at 5113.276 kb on - strand, within Psyr_4287 at 5113.276 kb on - strand, within Psyr_4287 at 5113.428 kb on + strand, within Psyr_4287 at 5113.463 kb on + strand, within Psyr_4287 at 5113.647 kb on + strand, within Psyr_4287 at 5113.647 kb on + strand, within Psyr_4287 at 5113.647 kb on + strand, within Psyr_4287 at 5113.647 kb on + strand, within Psyr_4287 at 5113.647 kb on + strand, within Psyr_4287 at 5113.737 kb on + strand, within Psyr_4287 at 5113.737 kb on + strand, within Psyr_4287 at 5113.737 kb on + strand, within Psyr_4287 at 5113.737 kb on + strand, within Psyr_4287 at 5113.737 kb on + strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.738 kb on - strand, within Psyr_4287 at 5113.741 kb on + strand, within Psyr_4287 at 5113.742 kb on - strand, within Psyr_4287 at 5113.742 kb on - strand, within Psyr_4287 at 5113.742 kb on - strand, within Psyr_4287 at 5113.742 kb on - strand, within Psyr_4287 at 5113.742 kb on - strand, within Psyr_4287
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 5,110,691 + -0.3 5,110,691 + -0.4 5,110,691 + -0.3 5,110,691 + -0.5 5,110,692 - -0.2 5,110,692 - +4.6 5,110,692 - +0.1 5,110,696 - +1.0 5,110,696 - +0.5 5,110,775 + Psyr_4285 0.13 -1.6 5,110,775 + Psyr_4285 0.13 +0.3 5,110,776 - Psyr_4285 0.14 -0.3 5,110,784 - Psyr_4285 0.15 +0.7 5,111,049 + Psyr_4285 0.65 +1.0 5,111,261 - +0.1 5,111,272 + +0.1 5,111,272 + -0.1 5,111,333 + +0.3 5,111,333 + +0.4 5,111,333 + +0.3 5,111,333 + +0.0 5,111,333 + +1.8 5,111,333 + +0.9 5,111,333 + -0.3 5,111,334 - -0.1 5,111,334 - -0.5 5,111,334 - -0.0 5,111,334 - +0.5 5,111,387 + -0.4 5,111,387 + +0.1 5,111,388 - -0.1 5,111,388 - -0.7 5,111,388 - +0.6 5,111,590 + +1.3 5,111,590 + +1.9 5,111,590 + -0.3 5,111,590 + +0.4 5,111,590 + +0.6 5,111,590 + +1.7 5,111,590 + -0.1 5,111,590 + -0.5 5,111,591 - +2.3 5,111,591 - +0.3 5,111,591 - -0.7 5,111,591 - +0.7 5,111,591 - -0.1 5,111,591 - -0.7 5,111,591 - -0.6 5,111,754 + Psyr_4286 0.20 +0.4 5,111,754 + Psyr_4286 0.20 -0.1 5,111,754 + Psyr_4286 0.20 +3.2 5,111,755 - Psyr_4286 0.20 -0.6 5,111,758 + Psyr_4286 0.20 -0.3 5,111,758 + Psyr_4286 0.20 -0.0 5,111,758 + Psyr_4286 0.20 -1.1 5,111,759 - Psyr_4286 0.20 -0.7 5,111,759 - Psyr_4286 0.20 +0.4 5,111,759 - Psyr_4286 0.20 -1.4 5,111,759 - Psyr_4286 0.20 -1.3 5,111,759 - Psyr_4286 0.20 -0.3 5,111,795 + Psyr_4286 0.23 +1.3 5,111,875 - Psyr_4286 0.29 +0.5 5,111,875 - Psyr_4286 0.29 -3.0 5,111,875 - Psyr_4286 0.29 +0.4 5,111,955 + Psyr_4286 0.35 -1.0 5,112,058 + Psyr_4286 0.43 -0.8 5,112,058 + Psyr_4286 0.43 -1.4 5,112,059 - Psyr_4286 0.43 -0.0 5,112,357 + Psyr_4286 0.66 -0.5 5,112,358 - Psyr_4286 0.66 -0.9 5,112,358 - Psyr_4286 0.66 +0.9 5,112,406 + Psyr_4286 0.70 -0.3 5,112,406 + Psyr_4286 0.70 -1.6 5,112,406 + Psyr_4286 0.70 -0.2 5,112,407 - Psyr_4286 0.70 +1.3 5,112,620 + Psyr_4286 0.86 +0.4 5,112,621 - Psyr_4286 0.86 +1.0 5,112,653 - Psyr_4286 0.89 -1.7 5,112,653 - Psyr_4286 0.89 +0.5 5,112,653 - Psyr_4286 0.89 -1.5 5,112,653 - Psyr_4286 0.89 -0.6 5,112,653 - Psyr_4286 0.89 -0.4 5,112,820 - -1.7 5,112,820 - -2.2 5,112,918 + Psyr_4287 0.12 -0.3 5,112,918 + Psyr_4287 0.12 -1.1 5,112,918 + Psyr_4287 0.12 +0.2 5,112,919 - Psyr_4287 0.12 +0.4 5,112,919 - Psyr_4287 0.12 +0.1 5,112,919 - Psyr_4287 0.12 +0.3 5,112,920 + Psyr_4287 0.12 -0.4 5,112,920 + Psyr_4287 0.12 +0.3 5,112,920 + Psyr_4287 0.12 +0.4 5,112,920 + Psyr_4287 0.12 +0.5 5,112,920 + Psyr_4287 0.12 +0.7 5,112,920 + Psyr_4287 0.12 +1.1 5,112,921 - Psyr_4287 0.12 +0.4 5,112,921 - Psyr_4287 0.12 +0.2 5,112,921 - Psyr_4287 0.12 -0.4 5,112,921 - Psyr_4287 0.12 -0.1 5,112,970 - Psyr_4287 0.16 +1.4 5,112,970 - Psyr_4287 0.16 -0.4 5,113,041 - Psyr_4287 0.23 -0.4 5,113,275 + Psyr_4287 0.44 +0.2 5,113,275 + Psyr_4287 0.44 -2.3 5,113,275 + Psyr_4287 0.44 -1.3 5,113,275 + Psyr_4287 0.44 -1.6 5,113,275 + Psyr_4287 0.44 -1.4 5,113,275 + Psyr_4287 0.44 -0.1 5,113,275 + Psyr_4287 0.44 -0.3 5,113,275 + Psyr_4287 0.44 -0.4 5,113,275 + Psyr_4287 0.44 -0.3 5,113,275 + Psyr_4287 0.44 -0.4 5,113,276 - Psyr_4287 0.45 -0.1 5,113,276 - Psyr_4287 0.45 -1.2 5,113,276 - Psyr_4287 0.45 +1.1 5,113,276 - Psyr_4287 0.45 +0.9 5,113,276 - Psyr_4287 0.45 +0.5 5,113,276 - Psyr_4287 0.45 -0.1 5,113,428 + Psyr_4287 0.59 +1.4 5,113,463 + Psyr_4287 0.62 +0.0 5,113,647 + Psyr_4287 0.79 +2.7 5,113,647 + Psyr_4287 0.79 -0.9 5,113,647 + Psyr_4287 0.79 -1.6 5,113,647 + Psyr_4287 0.79 +0.7 5,113,647 + Psyr_4287 0.79 -0.3 5,113,737 + Psyr_4287 0.87 -0.7 5,113,737 + Psyr_4287 0.87 -1.3 5,113,737 + Psyr_4287 0.87 +0.9 5,113,737 + Psyr_4287 0.87 -0.2 5,113,737 + Psyr_4287 0.87 -0.6 5,113,738 - Psyr_4287 0.87 -0.2 5,113,738 - Psyr_4287 0.87 +0.1 5,113,738 - Psyr_4287 0.87 -1.7 5,113,738 - Psyr_4287 0.87 +0.6 5,113,738 - Psyr_4287 0.87 -1.1 5,113,738 - Psyr_4287 0.87 +0.7 5,113,738 - Psyr_4287 0.87 +1.1 5,113,738 - Psyr_4287 0.87 +0.2 5,113,738 - Psyr_4287 0.87 -0.6 5,113,741 + Psyr_4287 0.87 -0.4 5,113,742 - Psyr_4287 0.87 -0.3 5,113,742 - Psyr_4287 0.87 -0.2 5,113,742 - Psyr_4287 0.87 -0.5 5,113,742 - Psyr_4287 0.87 -0.1 5,113,742 - Psyr_4287 0.87 +0.2
Or see this region's nucleotide sequence