Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3000

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,595,511	+		Psyr_2998	0.80	+0.7
3,595,512	-		Psyr_2998	0.80	+2.1
3,595,512	-		Psyr_2998	0.80	-1.2
3,595,512	-		Psyr_2998	0.80	-0.4
3,595,512	-		Psyr_2998	0.80	+1.0
3,595,512	-		Psyr_2998	0.80	+0.7
3,595,575	-		Psyr_2998	0.86	+0.7
3,595,720	+				+1.5
3,595,772	+				-0.0
3,595,773	-				-0.8
3,595,894	+		Psyr_2999	0.21	+1.4
3,595,894	+		Psyr_2999	0.21	-0.3
3,595,894	+		Psyr_2999	0.21	-0.9
3,595,895	-		Psyr_2999	0.22	-0.8
3,595,895	-		Psyr_2999	0.22	-0.4
3,595,970	+		Psyr_2999	0.31	-0.8
3,595,971	-		Psyr_2999	0.31	+0.2
3,596,375	+		Psyr_2999	0.84	+1.5
3,596,516	+				-0.1
3,596,516	+				+1.3
3,596,516	+				-0.4
3,596,516	+				+0.2
3,596,516	+				+0.1
3,596,516	+				-0.3
3,596,517	-				-1.6
3,596,517	-				-0.8
3,596,573	+		Psyr_3000	0.12	+0.8
3,596,843	+		Psyr_3000	0.55	+0.6
3,596,847	-		Psyr_3000	0.56	+0.9
3,597,134	-				+0.5
3,597,134	-				-1.0
3,597,134	-				-1.2
3,597,359	+		Psyr_3001	0.41	-0.0
3,597,489	+		Psyr_3001	0.61	+0.5
3,597,490	-		Psyr_3001	0.61	-0.0
3,597,564	+		Psyr_3001	0.72	-0.7
3,597,564	+		Psyr_3001	0.72	-1.0
3,597,564	+		Psyr_3001	0.72	-0.3
3,597,564	+		Psyr_3001	0.72	-0.2
3,597,565	-		Psyr_3001	0.72	-1.4
3,597,565	-		Psyr_3001	0.72	-1.0
3,597,758	-				+4.1
3,597,964	-		Psyr_3002	0.20	+0.2
3,597,970	+		Psyr_3002	0.21	-0.4
3,598,051	+		Psyr_3002	0.28	+0.1
3,598,051	+		Psyr_3002	0.28	+0.5
3,598,051	+		Psyr_3002	0.28	-0.4
3,598,051	+				+2.7
3,598,052	-		Psyr_3002	0.28	+0.8