Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2974

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,565,464	-				-1.1
3,565,464	-				-0.2
3,565,469	+				-0.8
3,565,469	+				-1.2
3,565,470	-				-0.9
3,565,615	+		Psyr_2973	0.24	-1.6
3,565,615	+		Psyr_2973	0.24	+0.5
3,565,616	-		Psyr_2973	0.24	-0.3
3,565,681	+		Psyr_2973	0.36	+1.9
3,565,682	-		Psyr_2973	0.36	-0.6
3,566,001	+				+0.4
3,566,001	+				+0.6
3,566,343	+		Psyr_2974	0.15	-1.2
3,566,344	-		Psyr_2974	0.15	-0.3
3,566,345	-		Psyr_2974	0.15	+2.0
3,566,390	+		Psyr_2974	0.18	-0.5
3,566,583	+		Psyr_2974	0.30	-0.6
3,566,584	-		Psyr_2974	0.31	+0.4
3,566,645	+		Psyr_2974	0.34	+0.4
3,566,646	-		Psyr_2974	0.34	+0.6
3,566,662	-		Psyr_2974	0.36	+1.4
3,566,883	+		Psyr_2974	0.50	-2.7
3,566,883	+		Psyr_2974	0.50	-0.9
3,566,985	-		Psyr_2974	0.56	-1.3
3,566,985	-		Psyr_2974	0.56	-0.6
3,567,149	+		Psyr_2974	0.67	-0.5
3,567,149	+		Psyr_2974	0.67	-0.8
3,567,149	+		Psyr_2974	0.67	-0.5
3,567,150	-		Psyr_2974	0.67	-0.6
3,567,241	+		Psyr_2974	0.73	-0.0
3,567,302	+		Psyr_2974	0.76	-1.2
3,567,489	+		Psyr_2974	0.88	+1.2
3,567,489	+		Psyr_2974	0.88	-1.7
3,567,490	-		Psyr_2974	0.88	-0.2
3,567,490	-		Psyr_2974	0.88	-0.2
3,567,686	+				-0.0
3,567,686	+				+0.2
3,567,695	+				+0.6
3,567,701	+				+0.4
3,567,702	-				-1.1
3,567,753	-				+0.4
3,567,832	+				+1.0
3,567,832	+				-2.6
3,567,833	-				+0.8
3,567,888	+		Psyr_2975	0.17	-0.8
3,567,889	-		Psyr_2975	0.17	-0.2
3,568,028	+		Psyr_2975	0.41	+1.1
3,568,028	+		Psyr_2975	0.41	+0.8
3,568,029	-		Psyr_2975	0.42	+0.1
3,568,078	-		Psyr_2975	0.50	+0.4
3,568,078	-		Psyr_2975	0.50	+0.3
3,568,078	-		Psyr_2975	0.50	-0.6
3,568,078	-		Psyr_2975	0.50	+2.2
3,568,078	-		Psyr_2975	0.50	+0.4
3,568,152	+		Psyr_2975	0.63	-1.9
3,568,152	+		Psyr_2975	0.63	+0.8
3,568,152	+		Psyr_2975	0.63	+0.4
3,568,152	+		Psyr_2975	0.63	+0.4
3,568,152	+		Psyr_2975	0.63	+0.0
3,568,152	+		Psyr_2975	0.63	-0.3
3,568,153	-		Psyr_2975	0.64	+2.4
3,568,153	-		Psyr_2975	0.64	-0.6
3,568,153	-		Psyr_2975	0.64	-0.6
3,568,153	-		Psyr_2975	0.64	-1.0
3,568,185	+		Psyr_2975	0.69	-2.2
3,568,185	+		Psyr_2975	0.69	+0.2
3,568,185	+		Psyr_2975	0.69	-0.2
3,568,185	+		Psyr_2975	0.69	+0.4
3,568,186	-		Psyr_2975	0.70	+2.0
3,568,220	+		Psyr_2975	0.76	-1.0
3,568,250	+		Psyr_2975	0.81	+0.4
3,568,251	-		Psyr_2975	0.81	-0.9
3,568,335	-				+0.1
3,568,335	-				+0.5
3,568,351	+				+0.2
3,568,361	+				-0.3
3,568,361	+				+0.8
3,568,361	+				-0.1
3,568,362	-				-0.2
3,568,362	-				-0.4
3,568,362	-				+0.0
3,568,362	-				-0.9
3,568,362	-				-0.2
3,568,363	+				-1.2
3,568,364	-				-0.1
3,568,364	-				-0.3
3,568,364	-				-1.5
3,568,410	+				-0.3
3,568,410	+				-0.3
3,568,411	-				-1.2
3,568,411	-				+1.3
3,568,482	+				+1.6
3,568,551	-				+0.0
3,568,551	-				-1.1
3,568,582	+		Psyr_2976	0.12	-0.1
3,568,582	+		Psyr_2976	0.12	-0.4
3,568,583	-		Psyr_2976	0.12	+1.3
3,568,583	-		Psyr_2976	0.12	-0.8
3,568,586	+		Psyr_2976	0.12	-0.3
3,568,586	+		Psyr_2976	0.12	-0.3
3,568,586	+		Psyr_2976	0.12	-2.2
3,568,586	+		Psyr_2976	0.12	-1.0
3,568,586	+		Psyr_2976	0.12	-0.1
3,568,586	+		Psyr_2976	0.12	-0.9
3,568,586	+		Psyr_2976	0.12	-0.1
3,568,586	+		Psyr_2976	0.12	+1.0
3,568,586	+		Psyr_2976	0.12	+1.2
3,568,586	+		Psyr_2976	0.12	-0.1
3,568,587	-		Psyr_2976	0.12	-1.0
3,568,587	-		Psyr_2976	0.12	-2.4
3,568,587	-		Psyr_2976	0.12	+0.4
3,568,587	-		Psyr_2976	0.12	-0.4
3,568,664	+		Psyr_2976	0.20	-1.3
3,568,664	+		Psyr_2976	0.20	+0.3
3,568,665	-		Psyr_2976	0.21	+1.6