Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2972 and Psyr_2973 are separated by 151 nucleotides Psyr_2973 and Psyr_2974 are separated by 93 nucleotides Psyr_2974 and Psyr_2975 are separated by 124 nucleotides Psyr_2975 and Psyr_2976 are separated by 110 nucleotides
Psyr_2972: Psyr_2972 - conserved hypothetical protein, at 3,564,783 to 3,565,340
_2972
Psyr_2973: Psyr_2973 - Glyoxalase I, at 3,565,492 to 3,566,013
_2973
Psyr_2974: Psyr_2974 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase, at 3,566,107 to 3,567,669
_2974
Psyr_2975: Psyr_2975 - Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, at 3,567,794 to 3,568,357
_2975
Psyr_2976: Psyr_2976 - Phage integrase:Phage integrase, N-terminal SAM-like protein, at 3,568,468 to 3,569,427
_2976
Position (kb)
3566
3567
3568 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3565.464 kb on - strand at 3565.464 kb on - strand at 3565.469 kb on + strand at 3565.469 kb on + strand at 3565.470 kb on - strand at 3565.615 kb on + strand, within Psyr_2973 at 3565.615 kb on + strand, within Psyr_2973 at 3565.616 kb on - strand, within Psyr_2973 at 3565.681 kb on + strand, within Psyr_2973 at 3565.682 kb on - strand, within Psyr_2973 at 3566.001 kb on + strand at 3566.001 kb on + strand at 3566.343 kb on + strand, within Psyr_2974 at 3566.344 kb on - strand, within Psyr_2974 at 3566.345 kb on - strand, within Psyr_2974 at 3566.390 kb on + strand, within Psyr_2974 at 3566.583 kb on + strand, within Psyr_2974 at 3566.584 kb on - strand, within Psyr_2974 at 3566.645 kb on + strand, within Psyr_2974 at 3566.646 kb on - strand, within Psyr_2974 at 3566.662 kb on - strand, within Psyr_2974 at 3566.883 kb on + strand, within Psyr_2974 at 3566.883 kb on + strand, within Psyr_2974 at 3566.985 kb on - strand, within Psyr_2974 at 3566.985 kb on - strand, within Psyr_2974 at 3567.149 kb on + strand, within Psyr_2974 at 3567.149 kb on + strand, within Psyr_2974 at 3567.149 kb on + strand, within Psyr_2974 at 3567.150 kb on - strand, within Psyr_2974 at 3567.241 kb on + strand, within Psyr_2974 at 3567.302 kb on + strand, within Psyr_2974 at 3567.489 kb on + strand, within Psyr_2974 at 3567.489 kb on + strand, within Psyr_2974 at 3567.490 kb on - strand, within Psyr_2974 at 3567.490 kb on - strand, within Psyr_2974 at 3567.686 kb on + strand at 3567.686 kb on + strand at 3567.695 kb on + strand at 3567.701 kb on + strand at 3567.702 kb on - strand at 3567.753 kb on - strand at 3567.832 kb on + strand at 3567.832 kb on + strand at 3567.833 kb on - strand at 3567.888 kb on + strand, within Psyr_2975 at 3567.889 kb on - strand, within Psyr_2975 at 3568.028 kb on + strand, within Psyr_2975 at 3568.028 kb on + strand, within Psyr_2975 at 3568.029 kb on - strand, within Psyr_2975 at 3568.078 kb on - strand, within Psyr_2975 at 3568.078 kb on - strand, within Psyr_2975 at 3568.078 kb on - strand, within Psyr_2975 at 3568.078 kb on - strand, within Psyr_2975 at 3568.078 kb on - strand, within Psyr_2975 at 3568.152 kb on + strand, within Psyr_2975 at 3568.152 kb on + strand, within Psyr_2975 at 3568.152 kb on + strand, within Psyr_2975 at 3568.152 kb on + strand, within Psyr_2975 at 3568.152 kb on + strand, within Psyr_2975 at 3568.152 kb on + strand, within Psyr_2975 at 3568.153 kb on - strand, within Psyr_2975 at 3568.153 kb on - strand, within Psyr_2975 at 3568.153 kb on - strand, within Psyr_2975 at 3568.153 kb on - strand, within Psyr_2975 at 3568.185 kb on + strand, within Psyr_2975 at 3568.185 kb on + strand, within Psyr_2975 at 3568.185 kb on + strand, within Psyr_2975 at 3568.185 kb on + strand, within Psyr_2975 at 3568.186 kb on - strand, within Psyr_2975 at 3568.220 kb on + strand, within Psyr_2975 at 3568.250 kb on + strand, within Psyr_2975 at 3568.251 kb on - strand, within Psyr_2975 at 3568.335 kb on - strand at 3568.335 kb on - strand at 3568.351 kb on + strand at 3568.361 kb on + strand at 3568.361 kb on + strand at 3568.361 kb on + strand at 3568.362 kb on - strand at 3568.362 kb on - strand at 3568.362 kb on - strand at 3568.362 kb on - strand at 3568.362 kb on - strand at 3568.363 kb on + strand at 3568.364 kb on - strand at 3568.364 kb on - strand at 3568.364 kb on - strand at 3568.410 kb on + strand at 3568.410 kb on + strand at 3568.411 kb on - strand at 3568.411 kb on - strand at 3568.482 kb on + strand at 3568.551 kb on - strand at 3568.551 kb on - strand at 3568.582 kb on + strand, within Psyr_2976 at 3568.582 kb on + strand, within Psyr_2976 at 3568.583 kb on - strand, within Psyr_2976 at 3568.583 kb on - strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.586 kb on + strand, within Psyr_2976 at 3568.587 kb on - strand, within Psyr_2976 at 3568.587 kb on - strand, within Psyr_2976 at 3568.587 kb on - strand, within Psyr_2976 at 3568.587 kb on - strand, within Psyr_2976 at 3568.664 kb on + strand, within Psyr_2976 at 3568.664 kb on + strand, within Psyr_2976 at 3568.665 kb on - strand, within Psyr_2976
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 3,565,464 - -1.1 3,565,464 - -0.2 3,565,469 + -0.8 3,565,469 + -1.2 3,565,470 - -0.9 3,565,615 + Psyr_2973 0.24 -1.6 3,565,615 + Psyr_2973 0.24 +0.5 3,565,616 - Psyr_2973 0.24 -0.3 3,565,681 + Psyr_2973 0.36 +1.9 3,565,682 - Psyr_2973 0.36 -0.6 3,566,001 + +0.4 3,566,001 + +0.6 3,566,343 + Psyr_2974 0.15 -1.2 3,566,344 - Psyr_2974 0.15 -0.3 3,566,345 - Psyr_2974 0.15 +2.0 3,566,390 + Psyr_2974 0.18 -0.5 3,566,583 + Psyr_2974 0.30 -0.6 3,566,584 - Psyr_2974 0.31 +0.4 3,566,645 + Psyr_2974 0.34 +0.4 3,566,646 - Psyr_2974 0.34 +0.6 3,566,662 - Psyr_2974 0.36 +1.4 3,566,883 + Psyr_2974 0.50 -2.7 3,566,883 + Psyr_2974 0.50 -0.9 3,566,985 - Psyr_2974 0.56 -1.3 3,566,985 - Psyr_2974 0.56 -0.6 3,567,149 + Psyr_2974 0.67 -0.5 3,567,149 + Psyr_2974 0.67 -0.8 3,567,149 + Psyr_2974 0.67 -0.5 3,567,150 - Psyr_2974 0.67 -0.6 3,567,241 + Psyr_2974 0.73 -0.0 3,567,302 + Psyr_2974 0.76 -1.2 3,567,489 + Psyr_2974 0.88 +1.2 3,567,489 + Psyr_2974 0.88 -1.7 3,567,490 - Psyr_2974 0.88 -0.2 3,567,490 - Psyr_2974 0.88 -0.2 3,567,686 + -0.0 3,567,686 + +0.2 3,567,695 + +0.6 3,567,701 + +0.4 3,567,702 - -1.1 3,567,753 - +0.4 3,567,832 + +1.0 3,567,832 + -2.6 3,567,833 - +0.8 3,567,888 + Psyr_2975 0.17 -0.8 3,567,889 - Psyr_2975 0.17 -0.2 3,568,028 + Psyr_2975 0.41 +1.1 3,568,028 + Psyr_2975 0.41 +0.8 3,568,029 - Psyr_2975 0.42 +0.1 3,568,078 - Psyr_2975 0.50 +0.4 3,568,078 - Psyr_2975 0.50 +0.3 3,568,078 - Psyr_2975 0.50 -0.6 3,568,078 - Psyr_2975 0.50 +2.2 3,568,078 - Psyr_2975 0.50 +0.4 3,568,152 + Psyr_2975 0.63 -1.9 3,568,152 + Psyr_2975 0.63 +0.8 3,568,152 + Psyr_2975 0.63 +0.4 3,568,152 + Psyr_2975 0.63 +0.4 3,568,152 + Psyr_2975 0.63 +0.0 3,568,152 + Psyr_2975 0.63 -0.3 3,568,153 - Psyr_2975 0.64 +2.4 3,568,153 - Psyr_2975 0.64 -0.6 3,568,153 - Psyr_2975 0.64 -0.6 3,568,153 - Psyr_2975 0.64 -1.0 3,568,185 + Psyr_2975 0.69 -2.2 3,568,185 + Psyr_2975 0.69 +0.2 3,568,185 + Psyr_2975 0.69 -0.2 3,568,185 + Psyr_2975 0.69 +0.4 3,568,186 - Psyr_2975 0.70 +2.0 3,568,220 + Psyr_2975 0.76 -1.0 3,568,250 + Psyr_2975 0.81 +0.4 3,568,251 - Psyr_2975 0.81 -0.9 3,568,335 - +0.1 3,568,335 - +0.5 3,568,351 + +0.2 3,568,361 + -0.3 3,568,361 + +0.8 3,568,361 + -0.1 3,568,362 - -0.2 3,568,362 - -0.4 3,568,362 - +0.0 3,568,362 - -0.9 3,568,362 - -0.2 3,568,363 + -1.2 3,568,364 - -0.1 3,568,364 - -0.3 3,568,364 - -1.5 3,568,410 + -0.3 3,568,410 + -0.3 3,568,411 - -1.2 3,568,411 - +1.3 3,568,482 + +1.6 3,568,551 - +0.0 3,568,551 - -1.1 3,568,582 + Psyr_2976 0.12 -0.1 3,568,582 + Psyr_2976 0.12 -0.4 3,568,583 - Psyr_2976 0.12 +1.3 3,568,583 - Psyr_2976 0.12 -0.8 3,568,586 + Psyr_2976 0.12 -0.3 3,568,586 + Psyr_2976 0.12 -0.3 3,568,586 + Psyr_2976 0.12 -2.2 3,568,586 + Psyr_2976 0.12 -1.0 3,568,586 + Psyr_2976 0.12 -0.1 3,568,586 + Psyr_2976 0.12 -0.9 3,568,586 + Psyr_2976 0.12 -0.1 3,568,586 + Psyr_2976 0.12 +1.0 3,568,586 + Psyr_2976 0.12 +1.2 3,568,586 + Psyr_2976 0.12 -0.1 3,568,587 - Psyr_2976 0.12 -1.0 3,568,587 - Psyr_2976 0.12 -2.4 3,568,587 - Psyr_2976 0.12 +0.4 3,568,587 - Psyr_2976 0.12 -0.4 3,568,664 + Psyr_2976 0.20 -1.3 3,568,664 + Psyr_2976 0.20 +0.3 3,568,665 - Psyr_2976 0.21 +1.6
Or see this region's nucleotide sequence