Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1855

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,132,392	+		Psyr_1854	0.25	+2.0
2,132,393	-		Psyr_1854	0.25	-0.1
2,132,422	+		Psyr_1854	0.28	+0.4
2,132,422	+		Psyr_1854	0.28	+0.7
2,132,596	+		Psyr_1854	0.43	+1.6
2,132,596	+		Psyr_1854	0.43	-1.6
2,132,724	-		Psyr_1854	0.54	+0.2
2,132,724	-		Psyr_1854	0.54	-1.1
2,132,735	-		Psyr_1854	0.54	-0.3
2,132,773	+		Psyr_1854	0.58	-0.1
2,132,774	-		Psyr_1854	0.58	+0.9
2,132,774	-		Psyr_1854	0.58	+0.0
2,132,776	+		Psyr_1854	0.58	+0.4
2,132,776	+		Psyr_1854	0.58	+0.8
2,132,777	-		Psyr_1854	0.58	-0.1
2,132,777	-		Psyr_1854	0.58	-0.7
2,132,777	-		Psyr_1854	0.58	+1.0
2,132,837	+		Psyr_1854	0.63	+2.4
2,132,918	+		Psyr_1854	0.70	+1.8
2,132,918	+		Psyr_1854	0.70	+0.3
2,132,918	+		Psyr_1854	0.70	-1.4
2,132,919	-		Psyr_1854	0.70	-0.2
2,133,066	+		Psyr_1854	0.83	+0.2
2,133,066	+		Psyr_1854	0.83	+2.0
2,133,067	-		Psyr_1854	0.83	+0.6
2,133,067	-		Psyr_1854	0.83	+1.1
2,133,067	-		Psyr_1854	0.83	-0.4
2,133,106	+		Psyr_1854	0.86	+0.7
2,133,148	+				-1.9
2,133,149	-				+2.3
2,133,149	-				+0.8
2,133,260	+				+1.3
2,133,260	+				-1.2
2,133,260	+				+0.4
2,133,261	-				+0.1
2,133,261	-				+0.3
2,133,261	-				-0.6
2,133,261	-				+1.1
2,133,348	+		Psyr_1855	0.14	-1.0
2,133,507	+		Psyr_1855	0.40	+0.4
2,133,507	+		Psyr_1855	0.40	-1.3
2,133,508	-		Psyr_1855	0.40	-1.3
2,133,610	-		Psyr_1855	0.57	+0.6
2,133,774	+		Psyr_1855	0.83	-0.3
2,133,774	+		Psyr_1855	0.83	+0.1
2,133,774	+		Psyr_1855	0.83	-0.2
2,133,774	+		Psyr_1855	0.83	-0.7
2,133,774	+		Psyr_1855	0.83	-0.7
2,133,775	-		Psyr_1855	0.84	-1.7
2,133,775	-		Psyr_1855	0.84	-1.0
2,133,899	+				+0.3
2,133,899	+				+0.5
2,133,899	+				-0.3
2,134,266	+		Psyr_1856	0.57	+0.3
2,134,266	+		Psyr_1856	0.57	-0.3
2,134,266	+		Psyr_1856	0.57	-0.0
2,134,267	-		Psyr_1856	0.57	-2.0
2,134,316	+		Psyr_1856	0.66	+0.2
2,134,316	+		Psyr_1856	0.66	-3.5
2,134,322	+		Psyr_1856	0.67	-0.2
2,134,322	+		Psyr_1856	0.67	+1.0
2,134,322	+		Psyr_1856	0.67	+0.0
2,134,322	+		Psyr_1856	0.67	+0.4
2,134,323	-		Psyr_1856	0.67	-2.2