Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1807

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,079,651	-		Psyr_1805	0.81	-1.3
2,079,651	-		Psyr_1805	0.81	+0.3
2,079,707	+		Psyr_1805	0.85	-0.6
2,079,707	+		Psyr_1805	0.85	+1.2
2,079,707	+		Psyr_1805	0.85	+1.1
2,079,708	-		Psyr_1805	0.85	+1.2
2,079,708	-		Psyr_1805	0.85	-0.1
2,079,708	-		Psyr_1805	0.85	-0.2
2,079,722	+		Psyr_1805	0.86	+3.9
2,079,722	+		Psyr_1805	0.86	-0.2
2,079,723	-		Psyr_1805	0.86	+1.2
2,079,723	-		Psyr_1805	0.86	+1.3
2,079,723	-		Psyr_1805	0.86	+0.5
2,079,723	-		Psyr_1805	0.86	-1.9
2,079,812	+				-0.5
2,079,812	+				-0.6
2,079,813	-				+0.7
2,079,813	-				+0.9
2,079,813	-				+0.9
2,079,888	+				+0.1
2,079,888	+				+1.4
2,079,888	+				-0.8
2,079,888	+				+0.6
2,079,888	+				+0.2
2,079,888	+				+1.0
2,079,888	+				+0.6
2,079,888	+				+0.1
2,079,888	+				+0.8
2,079,888	+				-1.2
2,079,889	-				-0.3
2,079,889	-				+1.8
2,079,889	-				+1.1
2,079,889	-				+0.2
2,079,889	-				-0.2
2,079,889	-				-0.2
2,079,889	-				-0.2
2,079,889	-				-0.4
2,079,889	-				-1.6
2,079,889	-				+0.8
2,079,889	-				+1.0
2,079,889	-				+1.4
2,079,889	-				+1.0
2,079,889	-				-0.0
2,079,958	+		Psyr_1806	0.10	+0.8
2,079,958	+		Psyr_1806	0.10	+2.4
2,079,958	+		Psyr_1806	0.10	+2.2
2,079,958	+		Psyr_1806	0.10	-0.6
2,079,959	-		Psyr_1806	0.10	-0.5
2,080,459	+				+0.4
2,080,462	-				+0.2
2,080,462	-				-0.5
2,080,520	+				-0.4
2,080,521	-				+0.2
2,080,552	+				-2.4
2,080,553	-				+0.7
2,080,573	+				-0.1
2,080,573	+				-0.1
2,080,573	+				-0.7
2,080,573	+				+0.2
2,080,573	+				-0.9
2,080,573	+				+0.4
2,080,573	+				+1.5
2,080,573	+				-0.3
2,080,574	-				+2.3
2,080,574	-				-1.1
2,080,574	-				-0.0
2,080,574	-				-0.3
2,080,574	-				-2.4
2,080,574	-				+1.0
2,080,574	-				+0.2
2,080,574	-				-0.3
2,080,574	-				+0.8
2,080,574	-				+0.4
2,080,574	-				+0.9
2,080,574	-				+0.6
2,080,574	-				-1.7
2,080,577	+				-0.6
2,080,577	+				+1.3
2,080,577	+				-0.2
2,080,577	+				+0.5
2,080,577	+				+0.7
2,080,577	+				-0.2
2,080,577	+				+1.0
2,080,577	+				+0.5
2,080,577	+				-0.9
2,080,577	+				-1.2
2,080,577	+				+1.0
2,080,577	+				+1.0
2,080,577	+				-1.6
2,080,577	+				-0.3
2,080,577	+				+0.7
2,080,577	+				-0.6
2,080,577	+				-0.6
2,080,577	+				-0.5
2,080,578	-				-2.3
2,080,578	-				+3.4
2,080,578	-				-0.4
2,080,578	-				-0.7
2,080,578	-				-0.5
2,080,578	-				-0.9
2,080,578	-				+0.7
2,080,578	-				-0.7
2,080,578	-				-0.4
2,080,578	-				-0.6
2,080,578	-				+0.4
2,080,578	-				-0.2
2,080,578	-				+0.9
2,080,578	-				+0.7
2,080,578	-				+1.0
2,080,578	-				+1.3
2,080,578	-				-1.2
2,080,578	-				-0.2
2,080,578	-				-0.6
2,080,578	-				-0.6
2,080,578	-				-0.2
2,080,579	+				+0.2
2,080,579	+				+0.2
2,080,579	+				+0.3
2,080,580	-				-0.8
2,080,580	-				-0.1
2,080,580	-				+0.0
2,080,580	-				-0.5
2,080,580	-				-1.2
2,080,580	-				-0.3
2,080,598	-				-0.4
2,080,611	+				-0.9
2,080,675	-				-0.1
2,080,859	+		Psyr_1807	0.24	-0.4
2,080,860	-		Psyr_1807	0.24	+0.4
2,080,860	-		Psyr_1807	0.24	-2.1
2,080,860	-		Psyr_1807	0.24	-1.4
2,080,860	-		Psyr_1807	0.24	-0.5
2,080,860	-		Psyr_1807	0.24	+0.1
2,081,162	-		Psyr_1807	0.54	-0.7
2,081,767	+		Psyr_1808	0.21	+0.7
2,081,767	+		Psyr_1808	0.21	-0.6
2,081,767	+		Psyr_1808	0.21	+0.8
2,081,767	+		Psyr_1808	0.21	+1.2
2,081,767	+		Psyr_1808	0.21	-0.4
2,081,768	-		Psyr_1808	0.22	+0.8
2,081,823	+		Psyr_1808	0.32	-0.2
2,081,823	+		Psyr_1808	0.32	+0.5
2,081,824	-		Psyr_1808	0.32	-1.9
2,081,824	-		Psyr_1808	0.32	-1.2
2,081,824	-		Psyr_1808	0.32	+0.3
2,081,824	-				+0.4
2,081,824	-		Psyr_1808	0.32	-0.2
2,082,099	+		Psyr_1808	0.86	-0.3
2,082,099	+		Psyr_1808	0.86	-0.6
2,082,099	+		Psyr_1808	0.86	+0.8
2,082,099	+		Psyr_1808	0.86	+1.6
2,082,099	+		Psyr_1808	0.86	-0.3
2,082,099	+		Psyr_1808	0.86	+0.7
2,082,099	+		Psyr_1808	0.86	+1.8
2,082,100	-		Psyr_1808	0.86	-0.5
2,082,100	-		Psyr_1808	0.86	+0.6
2,082,100	-		Psyr_1808	0.86	-2.1
2,082,100	-		Psyr_1808	0.86	-0.6
2,082,100	-		Psyr_1808	0.86	+0.1
2,082,100	-		Psyr_1808	0.86	-0.9
2,082,368	+		Psyr_1809	0.21	+0.5
2,082,396	-		Psyr_1809	0.24	-2.4
2,082,533	+		Psyr_1809	0.39	+0.1
2,082,533	+		Psyr_1809	0.39	+0.4
2,082,533	+		Psyr_1809	0.39	-0.9
2,082,534	-		Psyr_1809	0.39	+0.5
2,082,534	-		Psyr_1809	0.39	+0.5
2,082,534	-		Psyr_1809	0.39	+0.0