Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1646 and Psyr_1647 are separated by 15 nucleotides Psyr_1647 and Psyr_1648 are separated by 193 nucleotides Psyr_1648 and Psyr_1649 are separated by 114 nucleotides
Psyr_1646: Psyr_1646 - [Acyl-carrier-protein] S-malonyltransferase, at 1,851,557 to 1,852,495
_1646
Psyr_1647: Psyr_1647 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,852,511 to 1,853,254
_1647
Psyr_1648: Psyr_1648 - Acyl carrier protein (ACP), at 1,853,448 to 1,853,690
_1648
Psyr_1649: Psyr_1649 - 3-oxoacyl-[acyl-carrier-protein] synthase II, at 1,853,805 to 1,855,049
_1649
Position (kb) 1853
1854 Strain fitness (log2 ratio) -1
0
1
2
3 at 1853.243 kb on + strand at 1853.252 kb on + strand at 1853.252 kb on + strand at 1853.252 kb on + strand at 1853.252 kb on + strand at 1853.252 kb on + strand at 1853.283 kb on + strand at 1853.306 kb on + strand at 1853.306 kb on + strand at 1853.319 kb on + strand at 1853.319 kb on + strand at 1853.390 kb on + strand at 1853.392 kb on + strand at 1853.392 kb on + strand at 1854.228 kb on - strand, within Psyr_1649
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 1,853,243 + +1.1 1,853,252 + +1.5 1,853,252 + +0.1 1,853,252 + +0.5 1,853,252 + -0.5 1,853,252 + +2.3 1,853,283 + +1.5 1,853,306 + -0.5 1,853,306 + +1.7 1,853,319 + -0.9 1,853,319 + -0.5 1,853,390 + +3.3 1,853,392 + +0.9 1,853,392 + +0.1 1,854,228 - Psyr_1649 0.34 -0.8
Or see this region's nucleotide sequence