Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1521 and Psyr_1522 are separated by 815 nucleotides Psyr_1522 and Psyr_1523 are separated by 1 nucleotides Psyr_1523 and Psyr_1524 overlap by 4 nucleotides
Psyr_1521: Psyr_1521 - hypothetical protein, at 1,710,223 to 1,712,109
_1521
Psyr_1522: Psyr_1522 - Single-strand binding protein, at 1,712,925 to 1,713,389
_1522
Psyr_1523: Psyr_1523 - hypothetical protein, at 1,713,391 to 1,713,975
_1523
Psyr_1524: Psyr_1524 - conserved hypothetical protein, at 1,713,972 to 1,714,751
_1524
Position (kb) 1712
1713
1714 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1711.961 kb on + strand at 1711.969 kb on + strand at 1711.969 kb on + strand at 1711.997 kb on - strand at 1712.094 kb on + strand at 1712.094 kb on + strand at 1712.150 kb on - strand at 1712.176 kb on - strand at 1712.314 kb on + strand at 1712.314 kb on + strand at 1712.314 kb on + strand at 1712.314 kb on + strand at 1712.314 kb on + strand at 1712.315 kb on - strand at 1712.315 kb on - strand at 1712.315 kb on - strand at 1712.398 kb on + strand at 1712.436 kb on - strand at 1712.436 kb on - strand at 1712.444 kb on + strand at 1712.444 kb on + strand at 1712.444 kb on + strand at 1712.444 kb on + strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.445 kb on - strand at 1712.450 kb on + strand at 1712.450 kb on + strand at 1712.450 kb on + strand at 1712.450 kb on + strand at 1712.450 kb on + strand at 1712.450 kb on + strand at 1712.451 kb on - strand at 1712.451 kb on - strand at 1712.451 kb on - strand at 1712.451 kb on - strand at 1712.451 kb on - strand at 1712.490 kb on + strand at 1712.490 kb on + strand at 1712.491 kb on - strand at 1712.491 kb on - strand at 1712.493 kb on + strand at 1712.494 kb on - strand at 1712.494 kb on - strand at 1712.494 kb on - strand at 1712.494 kb on - strand at 1712.551 kb on + strand at 1712.551 kb on + strand at 1712.551 kb on + strand at 1712.551 kb on + strand at 1712.551 kb on + strand at 1712.551 kb on + strand at 1712.552 kb on - strand at 1712.552 kb on - strand at 1712.552 kb on - strand at 1712.552 kb on - strand at 1712.552 kb on - strand at 1712.620 kb on + strand at 1712.666 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.694 kb on + strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.695 kb on - strand at 1712.744 kb on + strand at 1712.744 kb on + strand at 1712.745 kb on - strand at 1712.745 kb on - strand at 1712.745 kb on - strand at 1712.745 kb on - strand at 1712.781 kb on + strand at 1712.837 kb on + strand at 1712.837 kb on + strand at 1712.838 kb on - strand at 1712.838 kb on - strand at 1712.838 kb on - strand at 1712.838 kb on - strand at 1712.926 kb on + strand at 1713.016 kb on + strand, within Psyr_1522 at 1713.016 kb on + strand, within Psyr_1522 at 1713.016 kb on + strand, within Psyr_1522 at 1713.017 kb on - strand, within Psyr_1522 at 1713.017 kb on - strand, within Psyr_1522 at 1713.017 kb on - strand, within Psyr_1522 at 1713.017 kb on - strand, within Psyr_1522 at 1713.125 kb on + strand, within Psyr_1522 at 1713.125 kb on + strand, within Psyr_1522 at 1713.125 kb on + strand, within Psyr_1522 at 1713.125 kb on + strand, within Psyr_1522 at 1713.185 kb on - strand, within Psyr_1522 at 1713.185 kb on - strand, within Psyr_1522 at 1713.209 kb on - strand, within Psyr_1522 at 1713.213 kb on + strand, within Psyr_1522 at 1713.213 kb on + strand, within Psyr_1522 at 1713.213 kb on + strand, within Psyr_1522 at 1713.213 kb on + strand, within Psyr_1522 at 1713.213 kb on + strand, within Psyr_1522 at 1713.214 kb on - strand, within Psyr_1522 at 1713.214 kb on - strand, within Psyr_1522 at 1713.214 kb on - strand, within Psyr_1522 at 1713.214 kb on - strand, within Psyr_1522 at 1713.214 kb on - strand, within Psyr_1522 at 1713.214 kb on - strand, within Psyr_1522 at 1713.284 kb on - strand, within Psyr_1522 at 1713.338 kb on + strand, within Psyr_1522 at 1713.363 kb on - strand at 1713.375 kb on + strand at 1713.376 kb on - strand at 1713.376 kb on - strand at 1713.376 kb on - strand at 1713.392 kb on + strand at 1713.392 kb on + strand at 1713.529 kb on + strand, within Psyr_1523 at 1713.529 kb on + strand, within Psyr_1523 at 1713.529 kb on + strand, within Psyr_1523 at 1713.529 kb on + strand, within Psyr_1523 at 1713.529 kb on + strand, within Psyr_1523 at 1713.529 kb on + strand, within Psyr_1523 at 1713.530 kb on - strand, within Psyr_1523 at 1713.530 kb on - strand, within Psyr_1523 at 1713.530 kb on - strand, within Psyr_1523 at 1713.530 kb on - strand, within Psyr_1523 at 1713.538 kb on - strand, within Psyr_1523 at 1713.715 kb on + strand, within Psyr_1523 at 1713.715 kb on + strand, within Psyr_1523 at 1713.715 kb on + strand, within Psyr_1523 at 1713.715 kb on + strand, within Psyr_1523 at 1713.715 kb on + strand, within Psyr_1523 at 1713.715 kb on + strand, within Psyr_1523 at 1713.716 kb on - strand, within Psyr_1523 at 1713.716 kb on - strand, within Psyr_1523 at 1713.716 kb on - strand, within Psyr_1523 at 1713.716 kb on - strand, within Psyr_1523 at 1713.716 kb on - strand, within Psyr_1523 at 1713.716 kb on - strand, within Psyr_1523 at 1713.726 kb on - strand, within Psyr_1523 at 1713.726 kb on - strand, within Psyr_1523 at 1713.799 kb on + strand, within Psyr_1523 at 1713.799 kb on + strand, within Psyr_1523 at 1713.799 kb on + strand, within Psyr_1523 at 1713.800 kb on - strand, within Psyr_1523 at 1713.800 kb on - strand, within Psyr_1523 at 1713.834 kb on + strand, within Psyr_1523 at 1713.834 kb on + strand, within Psyr_1523 at 1713.834 kb on + strand, within Psyr_1523 at 1713.834 kb on + strand, within Psyr_1523 at 1713.835 kb on - strand, within Psyr_1523 at 1713.844 kb on + strand, within Psyr_1523 at 1713.844 kb on + strand, within Psyr_1523 at 1713.845 kb on - strand, within Psyr_1523 at 1713.856 kb on + strand, within Psyr_1523 at 1713.880 kb on + strand, within Psyr_1523 at 1713.881 kb on - strand, within Psyr_1523 at 1713.969 kb on + strand at 1714.127 kb on + strand, within Psyr_1524 at 1714.127 kb on + strand, within Psyr_1524 at 1714.128 kb on - strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.156 kb on + strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.157 kb on - strand, within Psyr_1524 at 1714.305 kb on + strand, within Psyr_1524 at 1714.305 kb on + strand, within Psyr_1524 at 1714.305 kb on + strand, within Psyr_1524 at 1714.305 kb on + strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524 at 1714.306 kb on - strand, within Psyr_1524
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 1,711,961 + +0.2 1,711,969 + -0.2 1,711,969 + +1.3 1,711,997 - +0.8 1,712,094 + +0.6 1,712,094 + +2.6 1,712,150 - -1.1 1,712,176 - -0.3 1,712,314 + -1.6 1,712,314 + +0.3 1,712,314 + +0.2 1,712,314 + -0.1 1,712,314 + +0.4 1,712,315 - -1.6 1,712,315 - -0.7 1,712,315 - -2.2 1,712,398 + -0.4 1,712,436 - -2.7 1,712,436 - -1.2 1,712,444 + -0.7 1,712,444 + +0.2 1,712,444 + +1.0 1,712,444 + +1.1 1,712,445 - +0.0 1,712,445 - -0.6 1,712,445 - -0.2 1,712,445 - -0.2 1,712,445 - -0.3 1,712,445 - -1.2 1,712,445 - -0.0 1,712,445 - +1.0 1,712,450 + -1.1 1,712,450 + -0.7 1,712,450 + -0.0 1,712,450 + -0.5 1,712,450 + -0.8 1,712,450 + +1.3 1,712,451 - -1.1 1,712,451 - +0.3 1,712,451 - +0.1 1,712,451 - +0.3 1,712,451 - +0.3 1,712,490 + +0.3 1,712,490 + +1.2 1,712,491 - +0.0 1,712,491 - -1.0 1,712,493 + +0.4 1,712,494 - +0.3 1,712,494 - +0.1 1,712,494 - -0.1 1,712,494 - -1.0 1,712,551 + +0.3 1,712,551 + -1.6 1,712,551 + +0.0 1,712,551 + +0.3 1,712,551 + +0.2 1,712,551 + -1.9 1,712,552 - -0.6 1,712,552 - -1.2 1,712,552 - +0.7 1,712,552 - -0.1 1,712,552 - +0.6 1,712,620 + -1.2 1,712,666 + +0.8 1,712,694 + -0.4 1,712,694 + -0.7 1,712,694 + +0.2 1,712,694 + +0.5 1,712,694 + -0.9 1,712,694 + -0.7 1,712,694 + +0.2 1,712,694 + +0.5 1,712,694 + -0.4 1,712,694 + +0.3 1,712,694 + -2.4 1,712,694 + +0.6 1,712,695 - +0.1 1,712,695 - +1.0 1,712,695 - -0.0 1,712,695 - -0.2 1,712,695 - -0.7 1,712,695 - +0.2 1,712,695 - -0.2 1,712,695 - -1.2 1,712,744 + -1.7 1,712,744 + -0.0 1,712,745 - -1.1 1,712,745 - -1.9 1,712,745 - -0.4 1,712,745 - -1.4 1,712,781 + +0.6 1,712,837 + +0.3 1,712,837 + +0.7 1,712,838 - -0.6 1,712,838 - +0.6 1,712,838 - -0.0 1,712,838 - +0.5 1,712,926 + -1.4 1,713,016 + Psyr_1522 0.20 +1.8 1,713,016 + Psyr_1522 0.20 -0.6 1,713,016 + Psyr_1522 0.20 -0.1 1,713,017 - Psyr_1522 0.20 +0.8 1,713,017 - Psyr_1522 0.20 -0.4 1,713,017 - Psyr_1522 0.20 -0.6 1,713,017 - Psyr_1522 0.20 -1.7 1,713,125 + Psyr_1522 0.43 -0.9 1,713,125 + Psyr_1522 0.43 +2.6 1,713,125 + Psyr_1522 0.43 -0.2 1,713,125 + Psyr_1522 0.43 -0.7 1,713,185 - Psyr_1522 0.56 -0.0 1,713,185 - Psyr_1522 0.56 +1.2 1,713,209 - Psyr_1522 0.61 -1.5 1,713,213 + Psyr_1522 0.62 -2.6 1,713,213 + Psyr_1522 0.62 +1.5 1,713,213 + Psyr_1522 0.62 -1.8 1,713,213 + Psyr_1522 0.62 -1.4 1,713,213 + Psyr_1522 0.62 -1.1 1,713,214 - Psyr_1522 0.62 -0.4 1,713,214 - Psyr_1522 0.62 -1.2 1,713,214 - Psyr_1522 0.62 -0.4 1,713,214 - Psyr_1522 0.62 -1.9 1,713,214 - Psyr_1522 0.62 +0.6 1,713,214 - Psyr_1522 0.62 -1.0 1,713,284 - Psyr_1522 0.77 -0.7 1,713,338 + Psyr_1522 0.89 +0.2 1,713,363 - -0.6 1,713,375 + -0.8 1,713,376 - +1.6 1,713,376 - +0.4 1,713,376 - +0.3 1,713,392 + +0.3 1,713,392 + -0.3 1,713,529 + Psyr_1523 0.24 +0.0 1,713,529 + Psyr_1523 0.24 +0.9 1,713,529 + Psyr_1523 0.24 -0.7 1,713,529 + Psyr_1523 0.24 -1.4 1,713,529 + Psyr_1523 0.24 +0.6 1,713,529 + Psyr_1523 0.24 -1.1 1,713,530 - Psyr_1523 0.24 -0.0 1,713,530 - Psyr_1523 0.24 -2.4 1,713,530 - Psyr_1523 0.24 -0.7 1,713,530 - Psyr_1523 0.24 +0.2 1,713,538 - Psyr_1523 0.25 +1.2 1,713,715 + Psyr_1523 0.55 +2.4 1,713,715 + Psyr_1523 0.55 +1.6 1,713,715 + Psyr_1523 0.55 +0.6 1,713,715 + Psyr_1523 0.55 -0.0 1,713,715 + Psyr_1523 0.55 +1.0 1,713,715 + Psyr_1523 0.55 -0.1 1,713,716 - Psyr_1523 0.56 -0.5 1,713,716 - Psyr_1523 0.56 +0.5 1,713,716 - Psyr_1523 0.56 +2.0 1,713,716 - Psyr_1523 0.56 +0.2 1,713,716 - Psyr_1523 0.56 -0.6 1,713,716 - Psyr_1523 0.56 -2.2 1,713,726 - Psyr_1523 0.57 -1.1 1,713,726 - Psyr_1523 0.57 +0.0 1,713,799 + Psyr_1523 0.70 +0.2 1,713,799 + Psyr_1523 0.70 -0.6 1,713,799 + Psyr_1523 0.70 +1.9 1,713,800 - Psyr_1523 0.70 +1.2 1,713,800 - Psyr_1523 0.70 +1.2 1,713,834 + Psyr_1523 0.76 +0.1 1,713,834 + Psyr_1523 0.76 +0.9 1,713,834 + Psyr_1523 0.76 +0.7 1,713,834 + Psyr_1523 0.76 +0.5 1,713,835 - Psyr_1523 0.76 +0.7 1,713,844 + Psyr_1523 0.77 +2.2 1,713,844 + Psyr_1523 0.77 -0.8 1,713,845 - Psyr_1523 0.78 -0.1 1,713,856 + Psyr_1523 0.79 -0.2 1,713,880 + Psyr_1523 0.84 +0.7 1,713,881 - Psyr_1523 0.84 -0.6 1,713,969 + -0.6 1,714,127 + Psyr_1524 0.20 +1.3 1,714,127 + Psyr_1524 0.20 +0.9 1,714,128 - Psyr_1524 0.20 -1.6 1,714,156 + Psyr_1524 0.24 +0.6 1,714,156 + Psyr_1524 0.24 +0.8 1,714,156 + Psyr_1524 0.24 +1.0 1,714,156 + Psyr_1524 0.24 -0.1 1,714,156 + Psyr_1524 0.24 +2.6 1,714,156 + Psyr_1524 0.24 -0.3 1,714,156 + Psyr_1524 0.24 -1.8 1,714,156 + Psyr_1524 0.24 +2.3 1,714,156 + Psyr_1524 0.24 +0.6 1,714,156 + Psyr_1524 0.24 +1.4 1,714,156 + Psyr_1524 0.24 +0.6 1,714,156 + Psyr_1524 0.24 -1.7 1,714,156 + Psyr_1524 0.24 -0.9 1,714,157 - Psyr_1524 0.24 +0.8 1,714,157 - Psyr_1524 0.24 +1.7 1,714,157 - Psyr_1524 0.24 +0.2 1,714,157 - Psyr_1524 0.24 -1.1 1,714,157 - Psyr_1524 0.24 +0.4 1,714,157 - Psyr_1524 0.24 -1.1 1,714,157 - Psyr_1524 0.24 +0.6 1,714,157 - Psyr_1524 0.24 +0.5 1,714,157 - Psyr_1524 0.24 -0.1 1,714,157 - Psyr_1524 0.24 +1.3 1,714,157 - Psyr_1524 0.24 +0.0 1,714,157 - Psyr_1524 0.24 +0.6 1,714,305 + Psyr_1524 0.43 -0.2 1,714,305 + Psyr_1524 0.43 +0.1 1,714,305 + Psyr_1524 0.43 +2.0 1,714,305 + Psyr_1524 0.43 +0.6 1,714,306 - Psyr_1524 0.43 -1.1 1,714,306 - Psyr_1524 0.43 -0.1 1,714,306 - Psyr_1524 0.43 -0.7 1,714,306 - Psyr_1524 0.43 -1.1 1,714,306 - Psyr_1524 0.43 -0.4 1,714,306 - Psyr_1524 0.43 -0.6 1,714,306 - Psyr_1524 0.43 +0.3 1,714,306 - Psyr_1524 0.43 -1.2 1,714,306 - Psyr_1524 0.43 -0.2
Or see this region's nucleotide sequence