Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1138

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
1,288,510	+				-0.3
1,288,678	+		Psyr_1137	0.26	-0.1
1,288,752	+		Psyr_1137	0.36	+0.7
1,288,752	+		Psyr_1137	0.36	-0.3
1,288,752	+		Psyr_1137	0.36	+0.2
1,288,753	-		Psyr_1137	0.36	-0.1
1,288,753	-		Psyr_1137	0.36	+0.9
1,288,805	+		Psyr_1137	0.43	+0.7
1,288,916	-		Psyr_1137	0.57	+0.4
1,288,945	+		Psyr_1137	0.61	-1.4
1,288,945	+		Psyr_1137	0.61	-0.1
1,288,945	+		Psyr_1137	0.61	+1.1
1,288,946	-		Psyr_1137	0.61	+0.8
1,288,946	-		Psyr_1137	0.61	-0.8
1,288,946	-		Psyr_1137	0.61	-0.5
1,288,946	-		Psyr_1137	0.61	+0.3
1,288,996	+		Psyr_1137	0.68	+1.6
1,288,996	+		Psyr_1137	0.68	-1.7
1,288,996	+		Psyr_1137	0.68	-1.3
1,288,996	+		Psyr_1137	0.68	+2.2
1,288,997	-		Psyr_1137	0.68	-0.7
1,288,997	-		Psyr_1137	0.68	-0.2
1,288,997	-		Psyr_1137	0.68	+1.4
1,288,997	-		Psyr_1137	0.68	+1.4
1,288,997	-		Psyr_1137	0.68	-0.1
1,289,030	+		Psyr_1137	0.72	-0.4
1,289,031	-		Psyr_1137	0.73	+0.0
1,289,181	+				+1.7
1,289,238	+				-0.9
1,289,239	-				-0.2
1,289,263	-				-1.7
1,289,385	+				+1.8
1,289,470	+		Psyr_1138	0.25	-0.4
1,289,471	-		Psyr_1138	0.25	-0.9
1,289,904	+				+0.7
1,289,904	+				-0.1
1,289,904	+				+0.0
1,289,904	+				+0.7
1,289,904	+				+0.2
1,289,904	+				-0.2
1,289,905	-				-0.8
1,289,905	-				+3.4
1,289,905	-				+1.3
1,289,905	-				-0.8
1,289,905	-				-0.7
1,289,905	-				+0.3
1,289,905	-				+0.4
1,289,905	-				+0.9
1,290,032	+		Psyr_1139	0.17	-0.1
1,290,032	+		Psyr_1139	0.17	+1.2
1,290,032	+		Psyr_1139	0.17	+0.4
1,290,032	+		Psyr_1139	0.17	+0.2
1,290,032	+		Psyr_1139	0.17	-0.4
1,290,033	-		Psyr_1139	0.17	-0.5
1,290,033	-		Psyr_1139	0.17	-1.1
1,290,054	+		Psyr_1139	0.19	-0.3
1,290,138	+		Psyr_1139	0.29	+1.2
1,290,219	+		Psyr_1139	0.38	-0.0
1,290,219	+		Psyr_1139	0.38	-1.6
1,290,219	+		Psyr_1139	0.38	+0.1
1,290,219	+		Psyr_1139	0.38	-0.8
1,290,220	-		Psyr_1139	0.38	+0.9
1,290,220	-		Psyr_1139	0.38	-0.8
1,290,319	+		Psyr_1139	0.49	-0.8
1,290,370	+		Psyr_1139	0.55	-0.1
1,290,370	+		Psyr_1139	0.55	+0.2
1,290,370	+		Psyr_1139	0.55	-1.1
1,290,370	+		Psyr_1139	0.55	+0.2
1,290,613	+		Psyr_1139	0.82	+0.9
1,290,613	+		Psyr_1139	0.82	-0.1
1,290,613	+		Psyr_1139	0.82	+0.3
1,290,614	-		Psyr_1139	0.82	+0.8
1,290,624	+		Psyr_1139	0.83	-0.2
1,290,777	+				+0.1
1,290,777	+				+0.0
1,290,777	+				+0.3
1,290,777	+				+0.1
1,290,777	+				+0.1
1,290,777	+				-0.3
1,290,777	+				-2.1
1,290,777	+				+0.2
1,290,777	+				-0.8
1,290,777	+				-0.4
1,290,777	+				-0.5
1,290,777	+				-1.2
1,290,777	+				-0.6
1,290,777	+				-0.9
1,290,777	+				-2.1
1,290,777	+				-0.3
1,290,777	+				-0.5
1,290,777	+				+3.5
1,290,777	+				-0.7
1,290,777	+				+0.3
1,290,778	-				+0.7
1,290,778	-				-2.7
1,290,778	-				+1.1
1,290,778	-				+2.0
1,290,778	-				+0.8
1,290,778	-				+0.7
1,290,778	-				-0.1
1,290,778	-				+0.1
1,290,778	-				-0.3
1,290,778	-				-1.7
1,290,778	-				-0.1
1,290,778	-				+0.5
1,290,778	-				+1.9
1,290,778	-				+0.6
1,290,778	-				-0.2
1,290,778	-				+0.5
1,290,778	-				+1.0
1,290,778	-				+0.9
1,290,778	-				+0.5
1,290,778	-				-0.1
1,290,778	-				-0.1
1,290,794	+				+0.7
1,290,794	+				-0.4
1,290,795	-				+0.9
1,290,795	-				+0.6
1,290,795	-				-2.1
1,290,795	-				+0.0
1,290,798	+				-1.2
1,290,798	+				+0.2
1,290,798	+				-0.5
1,290,799	-				+0.3
1,290,799	-				+0.3
1,290,799	-				+0.3