Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0725 and Psyr_0726 are separated by 149 nucleotides Psyr_0726 and Psyr_0727 overlap by 4 nucleotides Psyr_0727 and Psyr_0728 are separated by 171 nucleotides
Psyr_0725: Psyr_0725 - competence lipoprotein ComL, putative, at 829,295 to 830,317
_0725
Psyr_0726: Psyr_0726 - ribosomal large subunit pseudouridine synthase D, at 830,467 to 831,429
_0726
Psyr_0727: Psyr_0727 - Protein of unknown function DUF152, at 831,426 to 832,154
_0727
Psyr_0728: Psyr_0728 - AAA ATPase, central region:Clp, N terminal:Clp, N terminal, at 832,326 to 834,890
_0728
Position (kb) 830
831
832 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 829.599 kb on + strand, within Psyr_0725 at 830.370 kb on - strand at 830.370 kb on - strand at 830.412 kb on - strand at 830.457 kb on + strand at 830.457 kb on + strand at 830.457 kb on + strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.479 kb on - strand at 830.479 kb on - strand at 830.480 kb on + strand at 830.481 kb on - strand at 830.481 kb on - strand at 830.481 kb on - strand at 830.546 kb on + strand at 830.546 kb on + strand at 830.547 kb on - strand at 830.726 kb on - strand, within Psyr_0726 at 830.970 kb on + strand, within Psyr_0726 at 830.970 kb on + strand, within Psyr_0726 at 830.971 kb on - strand, within Psyr_0726 at 830.971 kb on - strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 831.134 kb on + strand, within Psyr_0726 at 831.134 kb on + strand, within Psyr_0726 at 831.135 kb on - strand, within Psyr_0726 at 831.135 kb on - strand, within Psyr_0726 at 831.135 kb on - strand, within Psyr_0726 at 831.176 kb on + strand, within Psyr_0726 at 831.442 kb on + strand at 831.442 kb on + strand at 831.442 kb on + strand at 831.442 kb on + strand at 831.442 kb on + strand at 831.638 kb on - strand, within Psyr_0727 at 831.638 kb on - strand, within Psyr_0727 at 831.646 kb on + strand, within Psyr_0727 at 831.646 kb on + strand, within Psyr_0727 at 831.646 kb on + strand, within Psyr_0727 at 831.647 kb on - strand, within Psyr_0727 at 831.647 kb on - strand, within Psyr_0727 at 831.718 kb on + strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.037 kb on + strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.182 kb on + strand at 832.182 kb on + strand at 832.183 kb on - strand at 832.212 kb on - strand at 832.212 kb on - strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.255 kb on - strand at 832.255 kb on - strand at 832.255 kb on - strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.310 kb on + strand at 832.350 kb on - strand at 832.354 kb on + strand at 832.354 kb on + strand at 832.354 kb on + strand at 832.355 kb on - strand at 832.355 kb on - strand at 832.360 kb on + strand at 832.361 kb on - strand at 832.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 829,599 + Psyr_0725 0.30 -0.5 830,370 - -1.5 830,370 - -0.3 830,412 - -2.6 830,457 + -2.2 830,457 + +0.1 830,457 + -1.0 830,458 - +0.5 830,458 - -0.7 830,458 - +0.9 830,458 - -1.3 830,458 - +1.4 830,479 - +0.5 830,479 - +1.1 830,480 + -0.8 830,481 - -0.1 830,481 - -0.8 830,481 - +0.7 830,546 + -0.5 830,546 + +0.5 830,547 - -0.9 830,726 - Psyr_0726 0.27 -0.5 830,970 + Psyr_0726 0.52 -0.5 830,970 + Psyr_0726 0.52 -2.1 830,971 - Psyr_0726 0.52 -0.2 830,971 - Psyr_0726 0.52 -1.7 830,974 + Psyr_0726 0.53 +1.0 830,974 + Psyr_0726 0.53 -0.3 830,974 + Psyr_0726 0.53 -1.7 830,974 + Psyr_0726 0.53 -0.9 830,975 - Psyr_0726 0.53 +0.5 830,975 - Psyr_0726 0.53 -1.7 830,975 - Psyr_0726 0.53 +0.9 830,975 - Psyr_0726 0.53 +0.5 831,134 + Psyr_0726 0.69 -3.2 831,134 + Psyr_0726 0.69 +0.5 831,135 - Psyr_0726 0.69 +0.5 831,135 - Psyr_0726 0.69 -0.2 831,135 - Psyr_0726 0.69 -0.6 831,176 + Psyr_0726 0.74 +0.7 831,442 + +0.2 831,442 + +0.2 831,442 + +0.3 831,442 + -0.1 831,442 + +0.7 831,638 - Psyr_0727 0.29 -0.0 831,638 - Psyr_0727 0.29 +1.1 831,646 + Psyr_0727 0.30 -0.7 831,646 + Psyr_0727 0.30 +0.4 831,646 + Psyr_0727 0.30 +0.4 831,647 - Psyr_0727 0.30 +0.5 831,647 - Psyr_0727 0.30 -0.6 831,718 + Psyr_0727 0.40 +2.9 831,719 - Psyr_0727 0.40 +0.7 831,719 - Psyr_0727 0.40 -1.3 831,719 - Psyr_0727 0.40 +0.5 831,719 - Psyr_0727 0.40 +0.9 832,002 + Psyr_0727 0.79 +1.3 832,002 + Psyr_0727 0.79 -0.6 832,002 + Psyr_0727 0.79 +0.7 832,002 + Psyr_0727 0.79 +1.2 832,002 + Psyr_0727 0.79 -1.2 832,003 - Psyr_0727 0.79 -0.2 832,003 - Psyr_0727 0.79 -0.6 832,003 - Psyr_0727 0.79 -0.1 832,003 - Psyr_0727 0.79 -0.1 832,003 - Psyr_0727 0.79 -0.5 832,037 + Psyr_0727 0.84 +0.0 832,038 - Psyr_0727 0.84 -0.8 832,038 - Psyr_0727 0.84 +0.7 832,038 - Psyr_0727 0.84 -0.5 832,038 - Psyr_0727 0.84 +1.2 832,182 + +0.7 832,182 + -0.2 832,183 - -0.6 832,212 - +2.4 832,212 - +1.9 832,254 + +0.4 832,254 + +1.4 832,254 + +0.2 832,254 + +1.4 832,254 + -0.3 832,255 - -1.2 832,255 - -1.0 832,255 - +2.4 832,282 + +0.5 832,282 + +1.9 832,282 + +0.0 832,282 + +0.5 832,282 + +0.3 832,283 - -0.2 832,283 - +1.2 832,283 - +0.5 832,283 - -0.6 832,283 - -1.2 832,283 - +0.1 832,283 - -0.9 832,310 + +1.0 832,350 - -0.1 832,354 + -0.4 832,354 + -0.9 832,354 + -1.0 832,355 - -0.5 832,355 - +0.9 832,360 + +1.1 832,361 - -0.4 832,361 - -0.1
Or see this region's nucleotide sequence