Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30280 and AO356_30285 are separated by 205 nucleotides AO356_30285 and AO356_30290 are separated by 87 nucleotides AO356_30290 and AO356_30295 are separated by 156 nucleotides
AO356_30280: AO356_30280 - hypothetical protein, at 7,066,511 to 7,067,671
_30280
AO356_30285: AO356_30285 - aldehyde dehydrogenase, at 7,067,877 to 7,069,349
_30285
AO356_30290: AO356_30290 - rubredoxin, at 7,069,437 to 7,069,643
_30290
AO356_30295: AO356_30295 - fatty-acid oxidation protein subunit alpha, at 7,069,800 to 7,071,911
_30295
Position (kb)
7067
7068
7069
7070 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 7066.986 kb on + strand, within AO356_30280 at 7066.986 kb on + strand, within AO356_30280 at 7066.987 kb on - strand, within AO356_30280 at 7066.987 kb on - strand, within AO356_30280 at 7066.987 kb on - strand, within AO356_30280 at 7066.987 kb on - strand, within AO356_30280 at 7066.992 kb on + strand, within AO356_30280 at 7066.992 kb on + strand, within AO356_30280 at 7066.992 kb on + strand, within AO356_30280 at 7067.001 kb on + strand, within AO356_30280 at 7067.002 kb on - strand, within AO356_30280 at 7067.376 kb on + strand, within AO356_30280 at 7067.377 kb on - strand, within AO356_30280 at 7067.399 kb on - strand, within AO356_30280 at 7067.437 kb on - strand, within AO356_30280 at 7067.437 kb on - strand, within AO356_30280 at 7067.437 kb on - strand, within AO356_30280 at 7067.437 kb on - strand, within AO356_30280 at 7067.508 kb on + strand, within AO356_30280 at 7067.508 kb on + strand, within AO356_30280 at 7067.509 kb on - strand, within AO356_30280 at 7067.509 kb on - strand, within AO356_30280 at 7067.509 kb on - strand, within AO356_30280 at 7067.509 kb on - strand, within AO356_30280 at 7067.509 kb on - strand, within AO356_30280 at 7067.522 kb on + strand, within AO356_30280 at 7067.522 kb on + strand, within AO356_30280 at 7067.523 kb on - strand, within AO356_30280 at 7067.618 kb on - strand at 7067.644 kb on + strand at 7067.745 kb on - strand at 7067.920 kb on + strand at 7067.921 kb on - strand at 7067.957 kb on + strand at 7067.958 kb on - strand at 7068.014 kb on + strand at 7068.106 kb on - strand, within AO356_30285 at 7068.202 kb on - strand, within AO356_30285 at 7068.236 kb on - strand, within AO356_30285 at 7068.238 kb on + strand, within AO356_30285 at 7068.252 kb on + strand, within AO356_30285 at 7068.252 kb on + strand, within AO356_30285 at 7068.252 kb on + strand, within AO356_30285 at 7068.252 kb on + strand, within AO356_30285 at 7068.253 kb on - strand, within AO356_30285 at 7068.253 kb on - strand, within AO356_30285 at 7068.387 kb on + strand, within AO356_30285 at 7068.388 kb on - strand, within AO356_30285 at 7068.434 kb on + strand, within AO356_30285 at 7068.435 kb on - strand, within AO356_30285 at 7068.766 kb on - strand, within AO356_30285 at 7069.030 kb on - strand, within AO356_30285 at 7069.113 kb on - strand, within AO356_30285 at 7069.328 kb on + strand at 7069.329 kb on - strand at 7069.329 kb on - strand at 7069.362 kb on + strand at 7069.530 kb on + strand, within AO356_30290 at 7069.530 kb on + strand, within AO356_30290 at 7069.531 kb on - strand, within AO356_30290 at 7069.548 kb on - strand, within AO356_30290 at 7069.548 kb on - strand, within AO356_30290 at 7069.564 kb on + strand, within AO356_30290 at 7069.578 kb on + strand, within AO356_30290 at 7069.579 kb on - strand, within AO356_30290 at 7069.667 kb on + strand at 7069.803 kb on + strand at 7069.804 kb on - strand at 7069.866 kb on - strand at 7069.987 kb on + strand at 7070.027 kb on + strand, within AO356_30295 at 7070.027 kb on + strand, within AO356_30295 at 7070.028 kb on - strand, within AO356_30295 at 7070.028 kb on - strand, within AO356_30295 at 7070.028 kb on - strand, within AO356_30295 at 7070.070 kb on + strand, within AO356_30295 at 7070.070 kb on + strand, within AO356_30295 at 7070.106 kb on - strand, within AO356_30295 at 7070.200 kb on + strand, within AO356_30295 at 7070.273 kb on - strand, within AO356_30295 at 7070.311 kb on + strand, within AO356_30295 at 7070.311 kb on + strand, within AO356_30295
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 7,066,986 + AO356_30280 0.41 -1.7 7,066,986 + AO356_30280 0.41 +2.2 7,066,987 - AO356_30280 0.41 +0.2 7,066,987 - AO356_30280 0.41 +0.3 7,066,987 - AO356_30280 0.41 +0.2 7,066,987 - AO356_30280 0.41 +1.1 7,066,992 + AO356_30280 0.41 -0.9 7,066,992 + AO356_30280 0.41 +0.4 7,066,992 + AO356_30280 0.41 +0.4 7,067,001 + AO356_30280 0.42 -0.6 7,067,002 - AO356_30280 0.42 +1.2 7,067,376 + AO356_30280 0.75 +1.1 7,067,377 - AO356_30280 0.75 -0.1 7,067,399 - AO356_30280 0.76 -0.6 7,067,437 - AO356_30280 0.80 +0.1 7,067,437 - AO356_30280 0.80 +0.6 7,067,437 - AO356_30280 0.80 +0.5 7,067,437 - AO356_30280 0.80 +1.0 7,067,508 + AO356_30280 0.86 +0.2 7,067,508 + AO356_30280 0.86 +0.2 7,067,509 - AO356_30280 0.86 +2.0 7,067,509 - AO356_30280 0.86 +1.4 7,067,509 - AO356_30280 0.86 -0.8 7,067,509 - AO356_30280 0.86 -0.8 7,067,509 - AO356_30280 0.86 +0.7 7,067,522 + AO356_30280 0.87 -0.1 7,067,522 + AO356_30280 0.87 +0.1 7,067,523 - AO356_30280 0.87 -0.0 7,067,618 - +0.7 7,067,644 + +1.0 7,067,745 - -0.7 7,067,920 + -0.8 7,067,921 - +0.6 7,067,957 + -2.4 7,067,958 - +0.6 7,068,014 + +0.0 7,068,106 - AO356_30285 0.16 +0.2 7,068,202 - AO356_30285 0.22 +0.5 7,068,236 - AO356_30285 0.24 -0.6 7,068,238 + AO356_30285 0.25 -0.7 7,068,252 + AO356_30285 0.25 -1.2 7,068,252 + AO356_30285 0.25 -1.4 7,068,252 + AO356_30285 0.25 -1.0 7,068,252 + AO356_30285 0.25 -1.3 7,068,253 - AO356_30285 0.26 +0.4 7,068,253 - AO356_30285 0.26 +0.0 7,068,387 + AO356_30285 0.35 -0.7 7,068,388 - AO356_30285 0.35 -2.6 7,068,434 + AO356_30285 0.38 -1.4 7,068,435 - AO356_30285 0.38 +0.2 7,068,766 - AO356_30285 0.60 +0.3 7,069,030 - AO356_30285 0.78 -0.1 7,069,113 - AO356_30285 0.84 +0.1 7,069,328 + -1.0 7,069,329 - +0.5 7,069,329 - +0.1 7,069,362 + +0.9 7,069,530 + AO356_30290 0.45 -0.4 7,069,530 + AO356_30290 0.45 +1.2 7,069,531 - AO356_30290 0.45 +0.5 7,069,548 - AO356_30290 0.54 -0.5 7,069,548 - AO356_30290 0.54 -0.5 7,069,564 + AO356_30290 0.61 -0.5 7,069,578 + AO356_30290 0.68 -0.7 7,069,579 - AO356_30290 0.69 -0.6 7,069,667 + -0.3 7,069,803 + +0.5 7,069,804 - +0.4 7,069,866 - -0.2 7,069,987 + -0.8 7,070,027 + AO356_30295 0.11 -0.8 7,070,027 + AO356_30295 0.11 +0.9 7,070,028 - AO356_30295 0.11 +2.8 7,070,028 - AO356_30295 0.11 -0.7 7,070,028 - AO356_30295 0.11 -0.1 7,070,070 + AO356_30295 0.13 -0.1 7,070,070 + AO356_30295 0.13 -0.5 7,070,106 - AO356_30295 0.14 +0.8 7,070,200 + AO356_30295 0.19 +0.9 7,070,273 - AO356_30295 0.22 +0.1 7,070,311 + AO356_30295 0.24 +1.0 7,070,311 + AO356_30295 0.24 +0.1
Or see this region's nucleotide sequence