Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29215 and AO356_29220 overlap by 4 nucleotides AO356_29220 and AO356_29225 are separated by 80 nucleotides
AO356_29215: AO356_29215 - dehydrogenase, at 6,794,962 to 6,795,984
_29215
AO356_29220: AO356_29220 - hydroxypyruvate isomerase, at 6,795,981 to 6,796,772
_29220
AO356_29225: AO356_29225 - rhizopine-binding protein, at 6,796,853 to 6,797,779
_29225
Position (kb)
6795
6796
6797 Strain fitness (log2 ratio)
-1
0
1 at 6795.110 kb on + strand, within AO356_29215 at 6795.110 kb on + strand, within AO356_29215 at 6795.111 kb on - strand, within AO356_29215 at 6795.122 kb on + strand, within AO356_29215 at 6795.122 kb on + strand, within AO356_29215 at 6795.122 kb on + strand, within AO356_29215 at 6795.122 kb on + strand, within AO356_29215 at 6795.123 kb on - strand, within AO356_29215 at 6795.586 kb on + strand, within AO356_29215 at 6795.586 kb on + strand, within AO356_29215 at 6795.587 kb on - strand, within AO356_29215 at 6795.680 kb on - strand, within AO356_29215 at 6795.680 kb on - strand, within AO356_29215 at 6795.764 kb on - strand, within AO356_29215 at 6795.826 kb on + strand, within AO356_29215 at 6795.827 kb on - strand, within AO356_29215 at 6795.827 kb on - strand, within AO356_29215 at 6795.992 kb on - strand at 6796.090 kb on + strand, within AO356_29220 at 6796.419 kb on - strand, within AO356_29220 at 6796.522 kb on - strand, within AO356_29220 at 6796.822 kb on + strand at 6796.822 kb on + strand at 6796.967 kb on + strand, within AO356_29225 at 6796.968 kb on - strand, within AO356_29225 at 6796.968 kb on - strand, within AO356_29225 at 6796.968 kb on - strand, within AO356_29225 at 6796.968 kb on - strand, within AO356_29225 at 6797.175 kb on - strand, within AO356_29225 at 6797.771 kb on + strand at 6797.771 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 6,795,110 + AO356_29215 0.14 -0.7 6,795,110 + AO356_29215 0.14 -1.2 6,795,111 - AO356_29215 0.15 +0.1 6,795,122 + AO356_29215 0.16 +0.3 6,795,122 + AO356_29215 0.16 +0.9 6,795,122 + AO356_29215 0.16 +0.7 6,795,122 + AO356_29215 0.16 +0.6 6,795,123 - AO356_29215 0.16 +1.0 6,795,586 + AO356_29215 0.61 -0.0 6,795,586 + AO356_29215 0.61 +0.4 6,795,587 - AO356_29215 0.61 -0.4 6,795,680 - AO356_29215 0.70 -1.1 6,795,680 - AO356_29215 0.70 +1.7 6,795,764 - AO356_29215 0.78 +0.7 6,795,826 + AO356_29215 0.84 +0.2 6,795,827 - AO356_29215 0.85 -0.4 6,795,827 - AO356_29215 0.85 -0.5 6,795,992 - +1.4 6,796,090 + AO356_29220 0.14 -1.0 6,796,419 - AO356_29220 0.55 +0.1 6,796,522 - AO356_29220 0.68 +0.3 6,796,822 + +0.1 6,796,822 + +0.8 6,796,967 + AO356_29225 0.12 -0.4 6,796,968 - AO356_29225 0.12 +0.8 6,796,968 - AO356_29225 0.12 +0.2 6,796,968 - AO356_29225 0.12 +0.7 6,796,968 - AO356_29225 0.12 +0.2 6,797,175 - AO356_29225 0.35 +0.9 6,797,771 + +0.6 6,797,771 + +1.2
Or see this region's nucleotide sequence