Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28875 and AO356_28880 are separated by 94 nucleotides AO356_28880 and AO356_28885 are separated by 141 nucleotides
AO356_28875: AO356_28875 - porin, at 6,715,767 to 6,717,020
_28875
AO356_28880: AO356_28880 - damage-inducible protein CinA, at 6,717,115 to 6,718,419
_28880
AO356_28885: AO356_28885 - sodium:dicarboxylate symporter, at 6,718,561 to 6,719,886
_28885
Position (kb)
6717
6718
6719 Strain fitness (log2 ratio)
-2
-1
0
1 at 6716.171 kb on - strand, within AO356_28875 at 6716.171 kb on - strand, within AO356_28875 at 6716.245 kb on + strand, within AO356_28875 at 6716.338 kb on + strand, within AO356_28875 at 6716.339 kb on - strand, within AO356_28875 at 6716.344 kb on + strand, within AO356_28875 at 6716.344 kb on + strand, within AO356_28875 at 6716.344 kb on + strand, within AO356_28875 at 6716.345 kb on - strand, within AO356_28875 at 6716.375 kb on - strand, within AO356_28875 at 6716.375 kb on - strand, within AO356_28875 at 6716.389 kb on + strand, within AO356_28875 at 6716.389 kb on + strand, within AO356_28875 at 6716.536 kb on + strand, within AO356_28875 at 6716.536 kb on + strand, within AO356_28875 at 6716.536 kb on + strand, within AO356_28875 at 6716.868 kb on - strand, within AO356_28875 at 6717.041 kb on + strand at 6717.160 kb on - strand at 6717.371 kb on + strand, within AO356_28880 at 6717.374 kb on + strand, within AO356_28880 at 6717.375 kb on - strand, within AO356_28880 at 6717.391 kb on + strand, within AO356_28880 at 6717.612 kb on - strand, within AO356_28880 at 6717.719 kb on + strand, within AO356_28880 at 6717.719 kb on + strand, within AO356_28880 at 6717.770 kb on + strand, within AO356_28880 at 6717.771 kb on - strand, within AO356_28880 at 6717.771 kb on - strand, within AO356_28880 at 6717.771 kb on - strand, within AO356_28880 at 6717.771 kb on - strand, within AO356_28880 at 6717.771 kb on - strand, within AO356_28880 at 6718.033 kb on - strand, within AO356_28880 at 6718.034 kb on + strand, within AO356_28880 at 6718.034 kb on + strand, within AO356_28880 at 6718.034 kb on + strand, within AO356_28880 at 6718.067 kb on + strand, within AO356_28880 at 6718.068 kb on - strand, within AO356_28880 at 6718.068 kb on - strand, within AO356_28880 at 6718.068 kb on - strand, within AO356_28880 at 6718.369 kb on + strand at 6718.419 kb on + strand at 6718.419 kb on + strand at 6718.419 kb on + strand at 6718.420 kb on - strand at 6718.445 kb on + strand at 6718.445 kb on + strand at 6718.446 kb on - strand at 6718.446 kb on - strand at 6718.517 kb on + strand at 6718.562 kb on + strand at 6718.563 kb on - strand at 6718.958 kb on + strand, within AO356_28885 at 6718.958 kb on + strand, within AO356_28885 at 6719.202 kb on - strand, within AO356_28885 at 6719.310 kb on - strand, within AO356_28885 at 6719.390 kb on - strand, within AO356_28885
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 6,716,171 - AO356_28875 0.32 -0.3 6,716,171 - AO356_28875 0.32 +0.2 6,716,245 + AO356_28875 0.38 -1.2 6,716,338 + AO356_28875 0.46 -1.1 6,716,339 - AO356_28875 0.46 -0.4 6,716,344 + AO356_28875 0.46 -0.7 6,716,344 + AO356_28875 0.46 +0.4 6,716,344 + AO356_28875 0.46 +0.6 6,716,345 - AO356_28875 0.46 +0.2 6,716,375 - AO356_28875 0.48 -0.4 6,716,375 - AO356_28875 0.48 -0.7 6,716,389 + AO356_28875 0.50 -2.5 6,716,389 + AO356_28875 0.50 -0.6 6,716,536 + AO356_28875 0.61 -0.5 6,716,536 + AO356_28875 0.61 -0.4 6,716,536 + AO356_28875 0.61 -0.3 6,716,868 - AO356_28875 0.88 +1.1 6,717,041 + -0.0 6,717,160 - +0.7 6,717,371 + AO356_28880 0.20 +0.3 6,717,374 + AO356_28880 0.20 +0.3 6,717,375 - AO356_28880 0.20 +0.6 6,717,391 + AO356_28880 0.21 +0.5 6,717,612 - AO356_28880 0.38 +1.1 6,717,719 + AO356_28880 0.46 +1.3 6,717,719 + AO356_28880 0.46 +1.2 6,717,770 + AO356_28880 0.50 +0.6 6,717,771 - AO356_28880 0.50 -0.2 6,717,771 - AO356_28880 0.50 -1.2 6,717,771 - AO356_28880 0.50 -0.9 6,717,771 - AO356_28880 0.50 +0.5 6,717,771 - AO356_28880 0.50 +0.3 6,718,033 - AO356_28880 0.70 +1.2 6,718,034 + AO356_28880 0.70 +0.0 6,718,034 + AO356_28880 0.70 -0.2 6,718,034 + AO356_28880 0.70 +0.4 6,718,067 + AO356_28880 0.73 -0.6 6,718,068 - AO356_28880 0.73 +0.9 6,718,068 - AO356_28880 0.73 -0.4 6,718,068 - AO356_28880 0.73 +0.3 6,718,369 + -1.1 6,718,419 + -0.9 6,718,419 + +0.3 6,718,419 + +0.2 6,718,420 - -0.5 6,718,445 + +0.6 6,718,445 + +0.1 6,718,446 - +0.1 6,718,446 - -0.4 6,718,517 + +0.4 6,718,562 + +0.2 6,718,563 - +0.4 6,718,958 + AO356_28885 0.30 +0.6 6,718,958 + AO356_28885 0.30 -1.5 6,719,202 - AO356_28885 0.48 -0.7 6,719,310 - AO356_28885 0.56 +0.3 6,719,390 - AO356_28885 0.63 +1.1
Or see this region's nucleotide sequence