Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24880
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
5,637,888 | + | AO356_24875 | 0.45 | -0.5 | |
5,638,523 | + | +0.9 | |||
5,638,611 | - | AO356_24880 | 0.13 | +1.5 | |
5,638,724 | + | AO356_24880 | 0.25 | -0.9 | |
5,638,725 | - | AO356_24880 | 0.25 | +1.0 | |
5,639,211 | - | AO356_24880 | 0.74 | +1.2 | |
5,639,240 | + | AO356_24880 | 0.77 | +0.3 | |
5,639,391 | - | +0.5 | |||
5,639,444 | + | +0.4 | |||
5,639,445 | - | -2.7 | |||
5,639,485 | - | -0.6 | |||
5,639,517 | - | +0.5 | |||
5,639,640 | + | AO356_24885 | 0.14 | -0.4 | |
5,639,641 | - | AO356_24885 | 0.14 | +0.6 | |
5,639,834 | + | AO356_24885 | 0.33 | -0.9 | |
5,640,056 | + | AO356_24885 | 0.55 | -0.8 | |
5,640,056 | + | AO356_24885 | 0.55 | +1.2 | |
5,640,056 | + | AO356_24885 | 0.55 | -0.8 | |
5,640,089 | + | AO356_24885 | 0.58 | -0.6 | |
5,640,153 | - | AO356_24885 | 0.64 | -0.7 | |
5,640,449 | + | -1.5 | |||
5,640,449 | + | +1.1 | |||
5,640,449 | + | +2.2 | |||
5,640,450 | - | +1.4 | |||
5,640,450 | - | -0.3 | |||
5,640,450 | - | -0.4 | |||
5,640,450 | - | -0.4 | |||
5,640,450 | - | -1.5 |
Or see this region's nucleotide sequence