Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24280 and AO356_24285 are separated by 7 nucleotides AO356_24285 and AO356_24290 are separated by 292 nucleotides
AO356_24280: AO356_24280 - peptide synthase, at 5,475,279 to 5,478,707
_24280
AO356_24285: AO356_24285 - hypothetical protein, at 5,478,715 to 5,479,647
_24285
AO356_24290: AO356_24290 - energy transducer TonB, at 5,479,940 to 5,482,000
_24290
Position (kb)
5478
5479
5480 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5478.023 kb on - strand, within AO356_24280 at 5478.041 kb on - strand, within AO356_24280 at 5478.128 kb on - strand, within AO356_24280 at 5478.174 kb on + strand, within AO356_24280 at 5478.175 kb on - strand, within AO356_24280 at 5478.175 kb on - strand, within AO356_24280 at 5478.214 kb on + strand, within AO356_24280 at 5478.214 kb on + strand, within AO356_24280 at 5478.215 kb on - strand, within AO356_24280 at 5478.463 kb on + strand at 5478.463 kb on + strand at 5478.490 kb on + strand at 5478.839 kb on + strand, within AO356_24285 at 5478.896 kb on + strand, within AO356_24285 at 5478.897 kb on - strand, within AO356_24285 at 5478.897 kb on - strand, within AO356_24285 at 5478.950 kb on - strand, within AO356_24285 at 5479.175 kb on + strand, within AO356_24285 at 5479.187 kb on + strand, within AO356_24285 at 5479.187 kb on + strand, within AO356_24285 at 5479.187 kb on + strand, within AO356_24285 at 5479.334 kb on + strand, within AO356_24285 at 5479.334 kb on + strand, within AO356_24285 at 5479.335 kb on - strand, within AO356_24285 at 5479.389 kb on + strand, within AO356_24285 at 5479.389 kb on + strand, within AO356_24285 at 5479.389 kb on + strand, within AO356_24285 at 5479.389 kb on + strand, within AO356_24285 at 5479.389 kb on + strand, within AO356_24285 at 5479.390 kb on - strand, within AO356_24285 at 5479.390 kb on - strand, within AO356_24285 at 5479.390 kb on - strand, within AO356_24285 at 5479.391 kb on + strand, within AO356_24285 at 5479.530 kb on + strand, within AO356_24285 at 5479.531 kb on - strand, within AO356_24285 at 5479.531 kb on - strand, within AO356_24285 at 5479.708 kb on + strand at 5479.708 kb on + strand at 5479.708 kb on + strand at 5479.708 kb on + strand at 5479.710 kb on + strand at 5479.711 kb on - strand at 5479.776 kb on + strand at 5479.777 kb on - strand at 5479.782 kb on - strand at 5479.806 kb on - strand at 5479.975 kb on - strand at 5479.986 kb on + strand at 5479.987 kb on - strand at 5480.074 kb on + strand at 5480.182 kb on + strand, within AO356_24290 at 5480.279 kb on + strand, within AO356_24290 at 5480.280 kb on - strand, within AO356_24290 at 5480.393 kb on - strand, within AO356_24290 at 5480.393 kb on - strand, within AO356_24290 at 5480.543 kb on - strand, within AO356_24290 at 5480.574 kb on - strand, within AO356_24290 at 5480.575 kb on + strand, within AO356_24290
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,478,023 - AO356_24280 0.80 +0.3 5,478,041 - AO356_24280 0.81 -0.8 5,478,128 - AO356_24280 0.83 +0.7 5,478,174 + AO356_24280 0.84 +0.4 5,478,175 - AO356_24280 0.84 -0.6 5,478,175 - AO356_24280 0.84 -1.5 5,478,214 + AO356_24280 0.86 -0.6 5,478,214 + AO356_24280 0.86 +0.2 5,478,215 - AO356_24280 0.86 -1.8 5,478,463 + +0.9 5,478,463 + -0.3 5,478,490 + -0.3 5,478,839 + AO356_24285 0.13 -0.4 5,478,896 + AO356_24285 0.19 -1.8 5,478,897 - AO356_24285 0.20 -0.3 5,478,897 - AO356_24285 0.20 -1.7 5,478,950 - AO356_24285 0.25 -0.4 5,479,175 + AO356_24285 0.49 +0.2 5,479,187 + AO356_24285 0.51 -1.1 5,479,187 + AO356_24285 0.51 +2.1 5,479,187 + AO356_24285 0.51 -0.3 5,479,334 + AO356_24285 0.66 +0.1 5,479,334 + AO356_24285 0.66 -0.2 5,479,335 - AO356_24285 0.66 +0.2 5,479,389 + AO356_24285 0.72 +0.4 5,479,389 + AO356_24285 0.72 -1.5 5,479,389 + AO356_24285 0.72 -0.6 5,479,389 + AO356_24285 0.72 -1.1 5,479,389 + AO356_24285 0.72 +0.3 5,479,390 - AO356_24285 0.72 -0.2 5,479,390 - AO356_24285 0.72 -0.1 5,479,390 - AO356_24285 0.72 +0.3 5,479,391 + AO356_24285 0.72 +0.2 5,479,530 + AO356_24285 0.87 +0.8 5,479,531 - AO356_24285 0.87 +1.0 5,479,531 - AO356_24285 0.87 -0.5 5,479,708 + +0.8 5,479,708 + +0.0 5,479,708 + +0.7 5,479,708 + +0.8 5,479,710 + -0.6 5,479,711 - -0.4 5,479,776 + +0.5 5,479,777 - +0.4 5,479,782 - +1.2 5,479,806 - +0.6 5,479,975 - -0.1 5,479,986 + +0.3 5,479,987 - -0.4 5,480,074 + -0.1 5,480,182 + AO356_24290 0.12 +0.6 5,480,279 + AO356_24290 0.16 -0.5 5,480,280 - AO356_24290 0.16 -0.7 5,480,393 - AO356_24290 0.22 -0.6 5,480,393 - AO356_24290 0.22 +0.5 5,480,543 - AO356_24290 0.29 +0.8 5,480,574 - AO356_24290 0.31 -1.5 5,480,575 + AO356_24290 0.31 -2.3
Or see this region's nucleotide sequence