Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23360 and AO356_23365 are separated by 1 nucleotides AO356_23365 and AO356_23370 are separated by 123 nucleotides AO356_23370 and AO356_23375 are separated by 113 nucleotides
AO356_23360: AO356_23360 - diguanylate cyclase, at 5,238,818 to 5,240,161
_23360
AO356_23365: AO356_23365 - amino acid ABC transporter substrate-binding protein, at 5,240,163 to 5,240,921
_23365
AO356_23370: AO356_23370 - aldo/keto reductase, at 5,241,045 to 5,242,040
_23370
AO356_23375: AO356_23375 - transcriptional regulator, at 5,242,154 to 5,243,077
_23375
Position (kb)
5241
5242
5243 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5240.166 kb on + strand at 5240.167 kb on - strand at 5240.191 kb on + strand at 5240.192 kb on - strand at 5240.362 kb on + strand, within AO356_23365 at 5240.362 kb on + strand, within AO356_23365 at 5240.362 kb on + strand, within AO356_23365 at 5240.363 kb on - strand, within AO356_23365 at 5240.422 kb on + strand, within AO356_23365 at 5240.422 kb on + strand, within AO356_23365 at 5240.434 kb on + strand, within AO356_23365 at 5240.434 kb on + strand, within AO356_23365 at 5240.434 kb on + strand, within AO356_23365 at 5240.434 kb on + strand, within AO356_23365 at 5240.435 kb on - strand, within AO356_23365 at 5240.435 kb on - strand, within AO356_23365 at 5240.435 kb on - strand, within AO356_23365 at 5240.489 kb on - strand, within AO356_23365 at 5240.581 kb on + strand, within AO356_23365 at 5240.581 kb on + strand, within AO356_23365 at 5240.581 kb on + strand, within AO356_23365 at 5240.581 kb on + strand, within AO356_23365 at 5240.582 kb on - strand, within AO356_23365 at 5240.582 kb on - strand, within AO356_23365 at 5240.582 kb on - strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.587 kb on + strand, within AO356_23365 at 5240.588 kb on - strand, within AO356_23365 at 5240.588 kb on - strand, within AO356_23365 at 5240.588 kb on - strand, within AO356_23365 at 5240.588 kb on - strand, within AO356_23365 at 5240.645 kb on + strand, within AO356_23365 at 5240.659 kb on + strand, within AO356_23365 at 5240.659 kb on + strand, within AO356_23365 at 5240.809 kb on + strand, within AO356_23365 at 5240.809 kb on + strand, within AO356_23365 at 5240.809 kb on + strand, within AO356_23365 at 5240.809 kb on + strand, within AO356_23365 at 5240.810 kb on - strand, within AO356_23365 at 5240.969 kb on - strand at 5240.971 kb on + strand at 5240.971 kb on + strand at 5240.971 kb on + strand at 5240.972 kb on - strand at 5240.972 kb on - strand at 5240.972 kb on - strand at 5240.972 kb on - strand at 5240.977 kb on + strand at 5240.978 kb on - strand at 5240.978 kb on - strand at 5241.185 kb on - strand, within AO356_23370 at 5241.465 kb on - strand, within AO356_23370 at 5241.673 kb on + strand, within AO356_23370 at 5241.674 kb on - strand, within AO356_23370 at 5241.674 kb on - strand, within AO356_23370 at 5241.674 kb on - strand, within AO356_23370 at 5241.676 kb on + strand, within AO356_23370 at 5241.676 kb on + strand, within AO356_23370 at 5241.677 kb on - strand, within AO356_23370 at 5241.677 kb on - strand, within AO356_23370 at 5241.677 kb on - strand, within AO356_23370 at 5241.688 kb on + strand, within AO356_23370 at 5241.689 kb on - strand, within AO356_23370 at 5241.689 kb on - strand, within AO356_23370 at 5241.689 kb on - strand, within AO356_23370 at 5241.808 kb on + strand, within AO356_23370 at 5241.808 kb on + strand, within AO356_23370 at 5241.809 kb on - strand, within AO356_23370 at 5241.809 kb on - strand, within AO356_23370 at 5241.871 kb on + strand, within AO356_23370 at 5241.871 kb on + strand, within AO356_23370 at 5241.871 kb on + strand, within AO356_23370 at 5241.871 kb on + strand, within AO356_23370 at 5241.872 kb on - strand, within AO356_23370 at 5241.872 kb on - strand, within AO356_23370 at 5241.872 kb on - strand, within AO356_23370 at 5241.961 kb on + strand at 5241.961 kb on + strand at 5241.962 kb on - strand at 5242.006 kb on + strand at 5242.006 kb on + strand at 5242.046 kb on + strand at 5242.047 kb on - strand at 5242.047 kb on - strand at 5242.047 kb on - strand at 5242.119 kb on - strand at 5242.135 kb on + strand at 5242.346 kb on + strand, within AO356_23375 at 5242.346 kb on + strand, within AO356_23375 at 5242.346 kb on + strand, within AO356_23375 at 5242.346 kb on + strand, within AO356_23375 at 5242.346 kb on + strand, within AO356_23375 at 5242.347 kb on - strand, within AO356_23375 at 5242.347 kb on - strand, within AO356_23375 at 5242.347 kb on - strand, within AO356_23375 at 5242.350 kb on - strand, within AO356_23375 at 5242.350 kb on - strand, within AO356_23375 at 5242.350 kb on - strand, within AO356_23375 at 5242.496 kb on + strand, within AO356_23375 at 5242.594 kb on + strand, within AO356_23375 at 5242.664 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.832 kb on + strand, within AO356_23375 at 5242.833 kb on - strand, within AO356_23375 at 5242.833 kb on - strand, within AO356_23375 at 5242.833 kb on - strand, within AO356_23375 at 5242.836 kb on + strand, within AO356_23375 at 5242.836 kb on + strand, within AO356_23375 at 5242.836 kb on + strand, within AO356_23375 at 5242.836 kb on + strand, within AO356_23375 at 5242.836 kb on + strand, within AO356_23375 at 5242.837 kb on - strand, within AO356_23375 at 5242.837 kb on - strand, within AO356_23375 at 5242.837 kb on - strand, within AO356_23375 at 5242.837 kb on - strand, within AO356_23375 at 5242.837 kb on - strand, within AO356_23375 at 5242.923 kb on + strand, within AO356_23375 at 5242.924 kb on - strand, within AO356_23375 at 5242.924 kb on - strand, within AO356_23375 at 5242.935 kb on - strand, within AO356_23375
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,240,166 + -0.2 5,240,167 - +0.7 5,240,191 + +0.5 5,240,192 - -0.2 5,240,362 + AO356_23365 0.26 +0.4 5,240,362 + AO356_23365 0.26 -0.7 5,240,362 + AO356_23365 0.26 -0.1 5,240,363 - AO356_23365 0.26 -0.4 5,240,422 + AO356_23365 0.34 -0.1 5,240,422 + AO356_23365 0.34 +0.8 5,240,434 + AO356_23365 0.36 +0.5 5,240,434 + AO356_23365 0.36 +0.0 5,240,434 + AO356_23365 0.36 +0.2 5,240,434 + AO356_23365 0.36 +0.6 5,240,435 - AO356_23365 0.36 -0.8 5,240,435 - AO356_23365 0.36 +1.0 5,240,435 - AO356_23365 0.36 +0.8 5,240,489 - AO356_23365 0.43 +0.5 5,240,581 + AO356_23365 0.55 +0.4 5,240,581 + AO356_23365 0.55 +0.4 5,240,581 + AO356_23365 0.55 +0.4 5,240,581 + AO356_23365 0.55 +0.9 5,240,582 - AO356_23365 0.55 +0.3 5,240,582 - AO356_23365 0.55 -0.2 5,240,582 - AO356_23365 0.55 +0.4 5,240,587 + AO356_23365 0.56 +0.4 5,240,587 + AO356_23365 0.56 +0.7 5,240,587 + AO356_23365 0.56 +0.2 5,240,587 + AO356_23365 0.56 -0.2 5,240,587 + AO356_23365 0.56 +2.3 5,240,587 + AO356_23365 0.56 -0.1 5,240,587 + AO356_23365 0.56 +0.5 5,240,588 - AO356_23365 0.56 -0.3 5,240,588 - AO356_23365 0.56 -1.7 5,240,588 - AO356_23365 0.56 +0.3 5,240,588 - AO356_23365 0.56 -0.7 5,240,645 + AO356_23365 0.64 +0.2 5,240,659 + AO356_23365 0.65 +0.5 5,240,659 + AO356_23365 0.65 -1.3 5,240,809 + AO356_23365 0.85 -0.0 5,240,809 + AO356_23365 0.85 +0.6 5,240,809 + AO356_23365 0.85 -0.2 5,240,809 + AO356_23365 0.85 +1.1 5,240,810 - AO356_23365 0.85 -0.2 5,240,969 - +0.3 5,240,971 + +0.8 5,240,971 + +0.2 5,240,971 + -0.2 5,240,972 - +0.4 5,240,972 - +0.7 5,240,972 - +1.0 5,240,972 - -0.1 5,240,977 + -0.9 5,240,978 - -0.6 5,240,978 - -0.6 5,241,185 - AO356_23370 0.14 +0.7 5,241,465 - AO356_23370 0.42 +0.7 5,241,673 + AO356_23370 0.63 -0.6 5,241,674 - AO356_23370 0.63 -0.2 5,241,674 - AO356_23370 0.63 -0.5 5,241,674 - AO356_23370 0.63 -1.3 5,241,676 + AO356_23370 0.63 +1.1 5,241,676 + AO356_23370 0.63 +1.5 5,241,677 - AO356_23370 0.63 +0.1 5,241,677 - AO356_23370 0.63 +0.6 5,241,677 - AO356_23370 0.63 +0.1 5,241,688 + AO356_23370 0.65 -0.3 5,241,689 - AO356_23370 0.65 -0.0 5,241,689 - AO356_23370 0.65 +0.4 5,241,689 - AO356_23370 0.65 +0.4 5,241,808 + AO356_23370 0.77 -0.3 5,241,808 + AO356_23370 0.77 -0.7 5,241,809 - AO356_23370 0.77 +0.4 5,241,809 - AO356_23370 0.77 -1.6 5,241,871 + AO356_23370 0.83 +1.0 5,241,871 + AO356_23370 0.83 +1.0 5,241,871 + AO356_23370 0.83 +0.2 5,241,871 + AO356_23370 0.83 -0.5 5,241,872 - AO356_23370 0.83 -0.3 5,241,872 - AO356_23370 0.83 +0.4 5,241,872 - AO356_23370 0.83 +0.5 5,241,961 + -0.3 5,241,961 + +0.9 5,241,962 - +0.2 5,242,006 + -0.8 5,242,006 + -0.3 5,242,046 + +0.7 5,242,047 - -0.1 5,242,047 - +1.1 5,242,047 - -0.7 5,242,119 - -0.6 5,242,135 + -0.2 5,242,346 + AO356_23375 0.21 -0.5 5,242,346 + AO356_23375 0.21 -0.3 5,242,346 + AO356_23375 0.21 +0.5 5,242,346 + AO356_23375 0.21 +0.4 5,242,346 + AO356_23375 0.21 -0.0 5,242,347 - AO356_23375 0.21 -0.0 5,242,347 - AO356_23375 0.21 +0.8 5,242,347 - AO356_23375 0.21 -1.1 5,242,350 - AO356_23375 0.21 +1.1 5,242,350 - AO356_23375 0.21 +0.1 5,242,350 - AO356_23375 0.21 +0.7 5,242,496 + AO356_23375 0.37 -0.4 5,242,594 + AO356_23375 0.48 -0.2 5,242,664 + AO356_23375 0.55 -0.8 5,242,832 + AO356_23375 0.73 +1.1 5,242,832 + AO356_23375 0.73 +0.2 5,242,832 + AO356_23375 0.73 -2.1 5,242,832 + AO356_23375 0.73 -0.5 5,242,832 + AO356_23375 0.73 +0.6 5,242,832 + AO356_23375 0.73 -0.5 5,242,832 + AO356_23375 0.73 +0.3 5,242,833 - AO356_23375 0.73 -1.5 5,242,833 - AO356_23375 0.73 +0.4 5,242,833 - AO356_23375 0.73 -1.1 5,242,836 + AO356_23375 0.74 -0.2 5,242,836 + AO356_23375 0.74 -0.0 5,242,836 + AO356_23375 0.74 -0.9 5,242,836 + AO356_23375 0.74 -0.2 5,242,836 + AO356_23375 0.74 +0.1 5,242,837 - AO356_23375 0.74 -0.4 5,242,837 - AO356_23375 0.74 +0.2 5,242,837 - AO356_23375 0.74 -0.8 5,242,837 - AO356_23375 0.74 -0.3 5,242,837 - AO356_23375 0.74 +1.0 5,242,923 + AO356_23375 0.83 +0.8 5,242,924 - AO356_23375 0.83 +0.8 5,242,924 - AO356_23375 0.83 +1.3 5,242,935 - AO356_23375 0.85 -1.1
Or see this region's nucleotide sequence