Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23330 and AO356_23335 are separated by 195 nucleotides AO356_23335 and AO356_23340 are separated by 172 nucleotides
AO356_23330: AO356_23330 - aminoglycoside phosphotransferase, at 5,231,429 to 5,232,496
_23330
AO356_23335: AO356_23335 - hypothetical protein, at 5,232,692 to 5,233,087
_23335
AO356_23340: AO356_23340 - chemotaxis protein, at 5,233,260 to 5,235,287
_23340
Position (kb)
5232
5233
5234 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5231.991 kb on + strand, within AO356_23330 at 5231.992 kb on - strand, within AO356_23330 at 5231.992 kb on - strand, within AO356_23330 at 5232.033 kb on + strand, within AO356_23330 at 5232.033 kb on + strand, within AO356_23330 at 5232.081 kb on - strand, within AO356_23330 at 5232.165 kb on + strand, within AO356_23330 at 5232.166 kb on - strand, within AO356_23330 at 5232.166 kb on - strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.207 kb on + strand, within AO356_23330 at 5232.208 kb on - strand, within AO356_23330 at 5232.208 kb on - strand, within AO356_23330 at 5232.208 kb on - strand, within AO356_23330 at 5232.348 kb on + strand, within AO356_23330 at 5232.348 kb on + strand, within AO356_23330 at 5232.348 kb on + strand, within AO356_23330 at 5232.487 kb on + strand at 5232.488 kb on - strand at 5232.513 kb on + strand at 5232.545 kb on - strand at 5232.583 kb on + strand at 5232.583 kb on + strand at 5232.584 kb on - strand at 5232.584 kb on - strand at 5232.585 kb on + strand at 5232.585 kb on + strand at 5232.585 kb on + strand at 5232.586 kb on - strand at 5232.586 kb on - strand at 5232.586 kb on - strand at 5232.586 kb on - strand at 5232.586 kb on - strand at 5232.655 kb on + strand at 5232.655 kb on + strand at 5232.655 kb on + strand at 5232.713 kb on - strand at 5233.612 kb on - strand, within AO356_23340 at 5233.783 kb on + strand, within AO356_23340 at 5233.784 kb on - strand, within AO356_23340 at 5233.784 kb on - strand, within AO356_23340 at 5233.836 kb on + strand, within AO356_23340 at 5234.018 kb on - strand, within AO356_23340 at 5234.042 kb on - strand, within AO356_23340
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,231,991 + AO356_23330 0.53 -2.1 5,231,992 - AO356_23330 0.53 +0.1 5,231,992 - AO356_23330 0.53 +0.3 5,232,033 + AO356_23330 0.57 -0.5 5,232,033 + AO356_23330 0.57 -0.5 5,232,081 - AO356_23330 0.61 -0.2 5,232,165 + AO356_23330 0.69 -1.1 5,232,166 - AO356_23330 0.69 -0.9 5,232,166 - AO356_23330 0.69 +0.5 5,232,207 + AO356_23330 0.73 -0.3 5,232,207 + AO356_23330 0.73 +0.2 5,232,207 + AO356_23330 0.73 +0.3 5,232,207 + AO356_23330 0.73 +1.8 5,232,207 + AO356_23330 0.73 +0.7 5,232,208 - AO356_23330 0.73 +0.6 5,232,208 - AO356_23330 0.73 -0.6 5,232,208 - AO356_23330 0.73 +0.8 5,232,348 + AO356_23330 0.86 -0.0 5,232,348 + AO356_23330 0.86 -1.2 5,232,348 + AO356_23330 0.86 +0.0 5,232,487 + -0.3 5,232,488 - +0.6 5,232,513 + -0.0 5,232,545 - +0.4 5,232,583 + -0.4 5,232,583 + -0.4 5,232,584 - +0.0 5,232,584 - -1.4 5,232,585 + -0.7 5,232,585 + -0.6 5,232,585 + +0.2 5,232,586 - +0.3 5,232,586 - -1.4 5,232,586 - +1.1 5,232,586 - +0.9 5,232,586 - +0.1 5,232,655 + +0.2 5,232,655 + -0.3 5,232,655 + +0.6 5,232,713 - -0.0 5,233,612 - AO356_23340 0.17 +0.3 5,233,783 + AO356_23340 0.26 -1.1 5,233,784 - AO356_23340 0.26 +0.6 5,233,784 - AO356_23340 0.26 -0.6 5,233,836 + AO356_23340 0.28 +0.6 5,234,018 - AO356_23340 0.37 +0.2 5,234,042 - AO356_23340 0.39 -0.5
Or see this region's nucleotide sequence