Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20265 and AO356_20270 are separated by 189 nucleotides AO356_20270 and AO356_20275 are separated by 5 nucleotides AO356_20275 and AO356_20280 are separated by 189 nucleotides
AO356_20265: AO356_20265 - hypothetical protein, at 4,529,664 to 4,530,008
_20265
AO356_20270: AO356_20270 - GNAT family acetyltransferase, at 4,530,198 to 4,530,680
_20270
AO356_20275: AO356_20275 - glutathione S-transferase, at 4,530,686 to 4,531,318
_20275
AO356_20280: AO356_20280 - 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data) , at 4,531,508 to 4,532,488
_20280
Position (kb)
4530
4531
4532 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4529.762 kb on + strand, within AO356_20265 at 4529.762 kb on + strand, within AO356_20265 at 4529.763 kb on - strand, within AO356_20265 at 4529.763 kb on - strand, within AO356_20265 at 4529.763 kb on - strand, within AO356_20265 at 4530.124 kb on + strand at 4530.125 kb on - strand at 4530.136 kb on + strand at 4530.137 kb on - strand at 4530.162 kb on + strand at 4530.162 kb on + strand at 4530.163 kb on - strand at 4530.165 kb on + strand at 4530.165 kb on + strand at 4530.165 kb on + strand at 4530.166 kb on - strand at 4530.166 kb on - strand at 4530.166 kb on - strand at 4530.185 kb on - strand at 4530.411 kb on + strand, within AO356_20270 at 4530.411 kb on + strand, within AO356_20270 at 4530.432 kb on - strand, within AO356_20270 at 4530.441 kb on + strand, within AO356_20270 at 4530.441 kb on + strand, within AO356_20270 at 4530.456 kb on + strand, within AO356_20270 at 4530.456 kb on + strand, within AO356_20270 at 4530.456 kb on + strand, within AO356_20270 at 4530.456 kb on + strand, within AO356_20270 at 4530.456 kb on + strand, within AO356_20270 at 4530.457 kb on - strand, within AO356_20270 at 4530.457 kb on - strand, within AO356_20270 at 4530.457 kb on - strand, within AO356_20270 at 4530.457 kb on - strand, within AO356_20270 at 4530.592 kb on - strand, within AO356_20270 at 4530.747 kb on + strand at 4530.747 kb on + strand at 4530.803 kb on + strand, within AO356_20275 at 4530.804 kb on - strand, within AO356_20275 at 4530.855 kb on + strand, within AO356_20275 at 4530.855 kb on + strand, within AO356_20275 at 4530.855 kb on + strand, within AO356_20275 at 4530.856 kb on - strand, within AO356_20275 at 4530.982 kb on - strand, within AO356_20275 at 4531.061 kb on + strand, within AO356_20275 at 4531.103 kb on + strand, within AO356_20275 at 4531.103 kb on + strand, within AO356_20275 at 4531.103 kb on + strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.104 kb on - strand, within AO356_20275 at 4531.108 kb on + strand, within AO356_20275 at 4531.108 kb on + strand, within AO356_20275 at 4531.108 kb on + strand, within AO356_20275 at 4531.330 kb on + strand at 4531.330 kb on + strand at 4531.331 kb on - strand at 4531.358 kb on + strand at 4531.359 kb on - strand at 4531.359 kb on - strand at 4531.393 kb on - strand at 4531.433 kb on - strand at 4531.433 kb on - strand at 4531.435 kb on - strand at 4531.435 kb on - strand at 4531.435 kb on - strand at 4531.436 kb on + strand at 4531.462 kb on + strand at 4531.462 kb on + strand at 4531.463 kb on - strand at 4531.463 kb on - strand at 4531.463 kb on - strand at 4531.465 kb on - strand at 4531.465 kb on - strand at 4531.465 kb on - strand at 4531.559 kb on + strand at 4531.559 kb on + strand at 4531.560 kb on - strand at 4531.824 kb on + strand, within AO356_20280 at 4531.825 kb on - strand, within AO356_20280 at 4531.825 kb on - strand, within AO356_20280 at 4532.033 kb on - strand, within AO356_20280 at 4532.246 kb on + strand, within AO356_20280 at 4532.246 kb on + strand, within AO356_20280 at 4532.247 kb on - strand, within AO356_20280 at 4532.247 kb on - strand, within AO356_20280 at 4532.295 kb on + strand, within AO356_20280 at 4532.295 kb on + strand, within AO356_20280 at 4532.295 kb on + strand, within AO356_20280 at 4532.296 kb on - strand, within AO356_20280
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,529,762 + AO356_20265 0.28 -0.6 4,529,762 + AO356_20265 0.28 +1.1 4,529,763 - AO356_20265 0.29 -0.6 4,529,763 - AO356_20265 0.29 -2.6 4,529,763 - AO356_20265 0.29 +0.3 4,530,124 + -0.9 4,530,125 - +0.9 4,530,136 + +0.3 4,530,137 - -0.5 4,530,162 + +0.7 4,530,162 + -2.0 4,530,163 - +0.3 4,530,165 + +0.4 4,530,165 + -0.7 4,530,165 + +0.9 4,530,166 - +0.2 4,530,166 - -0.4 4,530,166 - -0.5 4,530,185 - -0.6 4,530,411 + AO356_20270 0.44 -0.1 4,530,411 + AO356_20270 0.44 +0.2 4,530,432 - AO356_20270 0.48 +0.1 4,530,441 + AO356_20270 0.50 +0.4 4,530,441 + AO356_20270 0.50 +0.8 4,530,456 + AO356_20270 0.53 +0.2 4,530,456 + AO356_20270 0.53 -2.2 4,530,456 + AO356_20270 0.53 +1.3 4,530,456 + AO356_20270 0.53 +0.5 4,530,456 + AO356_20270 0.53 +0.5 4,530,457 - AO356_20270 0.54 -0.2 4,530,457 - AO356_20270 0.54 +2.6 4,530,457 - AO356_20270 0.54 +0.1 4,530,457 - AO356_20270 0.54 -0.5 4,530,592 - AO356_20270 0.82 +0.4 4,530,747 + -1.2 4,530,747 + +0.1 4,530,803 + AO356_20275 0.18 -0.9 4,530,804 - AO356_20275 0.19 +0.0 4,530,855 + AO356_20275 0.27 -1.2 4,530,855 + AO356_20275 0.27 +0.4 4,530,855 + AO356_20275 0.27 -0.1 4,530,856 - AO356_20275 0.27 +0.4 4,530,982 - AO356_20275 0.47 -0.9 4,531,061 + AO356_20275 0.59 -0.2 4,531,103 + AO356_20275 0.66 -2.7 4,531,103 + AO356_20275 0.66 -0.0 4,531,103 + AO356_20275 0.66 -1.2 4,531,104 - AO356_20275 0.66 -0.4 4,531,104 - AO356_20275 0.66 -0.6 4,531,104 - AO356_20275 0.66 -0.6 4,531,104 - AO356_20275 0.66 -0.8 4,531,104 - AO356_20275 0.66 -0.3 4,531,104 - AO356_20275 0.66 -0.1 4,531,104 - AO356_20275 0.66 -0.2 4,531,108 + AO356_20275 0.67 +1.7 4,531,108 + AO356_20275 0.67 -0.8 4,531,108 + AO356_20275 0.67 -0.4 4,531,330 + +1.1 4,531,330 + +1.5 4,531,331 - -0.2 4,531,358 + -0.0 4,531,359 - -0.6 4,531,359 - -0.4 4,531,393 - -1.2 4,531,433 - +0.2 4,531,433 - -0.7 4,531,435 - -0.3 4,531,435 - -1.6 4,531,435 - +1.2 4,531,436 + +0.8 4,531,462 + +1.0 4,531,462 + +0.7 4,531,463 - +0.3 4,531,463 - +0.2 4,531,463 - -1.1 4,531,465 - -1.7 4,531,465 - -1.7 4,531,465 - -0.2 4,531,559 + +0.3 4,531,559 + +1.8 4,531,560 - -0.1 4,531,824 + AO356_20280 0.32 -1.2 4,531,825 - AO356_20280 0.32 +1.0 4,531,825 - AO356_20280 0.32 -0.8 4,532,033 - AO356_20280 0.54 +0.3 4,532,246 + AO356_20280 0.75 -0.3 4,532,246 + AO356_20280 0.75 +0.8 4,532,247 - AO356_20280 0.75 +0.1 4,532,247 - AO356_20280 0.75 +0.4 4,532,295 + AO356_20280 0.80 -0.8 4,532,295 + AO356_20280 0.80 +0.4 4,532,295 + AO356_20280 0.80 +0.0 4,532,296 - AO356_20280 0.80 +0.4
Or see this region's nucleotide sequence