Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18450 and AO356_18455 are separated by 2 nucleotides AO356_18455 and AO356_18460 are separated by 28 nucleotides
AO356_18450: AO356_18450 - outer membrane component of uptake system, probably for ferrous iron (from data) , at 4,153,636 to 4,154,733
_18450
AO356_18455: AO356_18455 - imelysin, at 4,154,736 to 4,155,800
_18455
AO356_18460: AO356_18460 - thiol oxidoreductase, at 4,155,829 to 4,157,256
_18460
Position (kb)
4154
4155
4156 Strain fitness (log2 ratio)
-1
0
1
2 at 4153.910 kb on + strand, within AO356_18450 at 4153.910 kb on + strand, within AO356_18450 at 4153.910 kb on + strand, within AO356_18450 at 4154.269 kb on + strand, within AO356_18450 at 4154.269 kb on + strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.309 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.361 kb on - strand, within AO356_18450 at 4154.399 kb on + strand, within AO356_18450 at 4154.399 kb on + strand, within AO356_18450 at 4154.400 kb on - strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.466 kb on - strand, within AO356_18450 at 4154.597 kb on + strand, within AO356_18450 at 4154.598 kb on - strand, within AO356_18450 at 4154.830 kb on + strand at 4154.830 kb on + strand at 4154.831 kb on - strand at 4154.923 kb on + strand, within AO356_18455 at 4155.090 kb on + strand, within AO356_18455 at 4155.090 kb on + strand, within AO356_18455 at 4155.090 kb on + strand, within AO356_18455 at 4155.091 kb on - strand, within AO356_18455 at 4155.319 kb on + strand, within AO356_18455 at 4155.320 kb on - strand, within AO356_18455 at 4155.320 kb on - strand, within AO356_18455 at 4155.320 kb on - strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.374 kb on - strand, within AO356_18455 at 4155.396 kb on + strand, within AO356_18455 at 4155.679 kb on + strand, within AO356_18455 at 4155.679 kb on + strand, within AO356_18455 at 4155.680 kb on - strand, within AO356_18455 at 4155.680 kb on - strand, within AO356_18455 at 4155.830 kb on + strand at 4155.831 kb on - strand at 4155.884 kb on - strand at 4156.106 kb on + strand, within AO356_18460 at 4156.163 kb on + strand, within AO356_18460 at 4156.163 kb on + strand, within AO356_18460 at 4156.164 kb on - strand, within AO356_18460 at 4156.164 kb on - strand, within AO356_18460 at 4156.274 kb on + strand, within AO356_18460 at 4156.275 kb on - strand, within AO356_18460 at 4156.483 kb on + strand, within AO356_18460 at 4156.483 kb on + strand, within AO356_18460 at 4156.484 kb on - strand, within AO356_18460 at 4156.484 kb on - strand, within AO356_18460 at 4156.668 kb on - strand, within AO356_18460 at 4156.748 kb on + strand, within AO356_18460 at 4156.748 kb on + strand, within AO356_18460 at 4156.749 kb on - strand, within AO356_18460 at 4156.749 kb on - strand, within AO356_18460 at 4156.749 kb on - strand, within AO356_18460 at 4156.764 kb on + strand, within AO356_18460 at 4156.765 kb on - strand, within AO356_18460
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,153,910 + AO356_18450 0.25 +0.1 4,153,910 + AO356_18450 0.25 +1.3 4,153,910 + AO356_18450 0.25 +0.6 4,154,269 + AO356_18450 0.58 +0.6 4,154,269 + AO356_18450 0.58 -1.7 4,154,270 - AO356_18450 0.58 +0.7 4,154,270 - AO356_18450 0.58 +0.5 4,154,270 - AO356_18450 0.58 -1.0 4,154,270 - AO356_18450 0.58 +0.3 4,154,270 - AO356_18450 0.58 +0.3 4,154,309 + AO356_18450 0.61 +0.8 4,154,360 + AO356_18450 0.66 -1.5 4,154,360 + AO356_18450 0.66 -0.6 4,154,360 + AO356_18450 0.66 -0.5 4,154,360 + AO356_18450 0.66 +0.2 4,154,361 - AO356_18450 0.66 -0.4 4,154,399 + AO356_18450 0.69 -0.7 4,154,399 + AO356_18450 0.69 -0.4 4,154,400 - AO356_18450 0.70 -1.0 4,154,465 + AO356_18450 0.76 +0.0 4,154,465 + AO356_18450 0.76 +1.2 4,154,465 + AO356_18450 0.76 -0.7 4,154,465 + AO356_18450 0.76 -0.0 4,154,466 - AO356_18450 0.76 +0.3 4,154,597 + AO356_18450 0.88 -1.0 4,154,598 - AO356_18450 0.88 +0.3 4,154,830 + -0.3 4,154,830 + -1.3 4,154,831 - -0.8 4,154,923 + AO356_18455 0.18 -0.5 4,155,090 + AO356_18455 0.33 +0.2 4,155,090 + AO356_18455 0.33 -0.6 4,155,090 + AO356_18455 0.33 -0.2 4,155,091 - AO356_18455 0.33 -0.5 4,155,319 + AO356_18455 0.55 -0.3 4,155,320 - AO356_18455 0.55 -1.1 4,155,320 - AO356_18455 0.55 -1.4 4,155,320 - AO356_18455 0.55 -0.9 4,155,373 + AO356_18455 0.60 +2.0 4,155,373 + AO356_18455 0.60 +0.5 4,155,373 + AO356_18455 0.60 +0.1 4,155,373 + AO356_18455 0.60 +0.0 4,155,373 + AO356_18455 0.60 -0.5 4,155,373 + AO356_18455 0.60 -1.7 4,155,374 - AO356_18455 0.60 -1.1 4,155,396 + AO356_18455 0.62 -0.4 4,155,679 + AO356_18455 0.89 +0.4 4,155,679 + AO356_18455 0.89 +1.5 4,155,680 - AO356_18455 0.89 -0.9 4,155,680 - AO356_18455 0.89 -0.0 4,155,830 + +0.0 4,155,831 - +0.4 4,155,884 - -1.1 4,156,106 + AO356_18460 0.19 +0.2 4,156,163 + AO356_18460 0.23 +0.0 4,156,163 + AO356_18460 0.23 -0.1 4,156,164 - AO356_18460 0.23 +0.6 4,156,164 - AO356_18460 0.23 +0.1 4,156,274 + AO356_18460 0.31 -0.9 4,156,275 - AO356_18460 0.31 +1.8 4,156,483 + AO356_18460 0.46 -0.6 4,156,483 + AO356_18460 0.46 -0.3 4,156,484 - AO356_18460 0.46 +0.3 4,156,484 - AO356_18460 0.46 -0.0 4,156,668 - AO356_18460 0.59 -0.1 4,156,748 + AO356_18460 0.64 -1.0 4,156,748 + AO356_18460 0.64 -0.7 4,156,749 - AO356_18460 0.64 +1.0 4,156,749 - AO356_18460 0.64 -0.2 4,156,749 - AO356_18460 0.64 -0.6 4,156,764 + AO356_18460 0.65 -0.5 4,156,765 - AO356_18460 0.66 +0.7
Or see this region's nucleotide sequence