Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13620 and AO356_13625 are separated by 38 nucleotides AO356_13625 and AO356_13630 are separated by 408 nucleotides
AO356_13620: AO356_13620 - hypothetical protein, at 3,088,714 to 3,089,595
_13620
AO356_13625: AO356_13625 - exou protein, at 3,089,634 to 3,091,415
_13625
AO356_13630: AO356_13630 - arabinose transporter permease, at 3,091,824 to 3,092,984
_13630
Position (kb)
3089
3090
3091
3092 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3088.682 kb on + strand at 3088.682 kb on + strand at 3088.683 kb on - strand at 3088.683 kb on - strand at 3088.683 kb on - strand at 3088.686 kb on + strand at 3088.686 kb on + strand at 3088.686 kb on + strand at 3088.687 kb on - strand at 3088.687 kb on - strand at 3088.687 kb on - strand at 3088.687 kb on - strand at 3088.687 kb on - strand at 3088.713 kb on + strand at 3088.713 kb on + strand at 3088.713 kb on + strand at 3088.713 kb on + strand at 3088.713 kb on + strand at 3088.714 kb on - strand at 3088.714 kb on - strand at 3088.714 kb on - strand at 3088.714 kb on - strand at 3088.714 kb on - strand at 3088.714 kb on - strand at 3088.978 kb on + strand, within AO356_13620 at 3089.152 kb on + strand, within AO356_13620 at 3089.152 kb on + strand, within AO356_13620 at 3089.152 kb on + strand, within AO356_13620 at 3089.152 kb on + strand, within AO356_13620 at 3089.152 kb on + strand, within AO356_13620 at 3089.152 kb on + strand, within AO356_13620 at 3089.153 kb on - strand, within AO356_13620 at 3089.153 kb on - strand, within AO356_13620 at 3089.347 kb on + strand, within AO356_13620 at 3089.347 kb on + strand, within AO356_13620 at 3089.347 kb on + strand, within AO356_13620 at 3089.347 kb on + strand, within AO356_13620 at 3089.347 kb on + strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.348 kb on - strand, within AO356_13620 at 3089.404 kb on + strand, within AO356_13620 at 3089.405 kb on - strand, within AO356_13620 at 3089.405 kb on - strand, within AO356_13620 at 3089.490 kb on + strand, within AO356_13620 at 3089.491 kb on - strand, within AO356_13620 at 3089.565 kb on + strand at 3089.565 kb on + strand at 3089.565 kb on + strand at 3089.566 kb on - strand at 3089.566 kb on - strand at 3089.566 kb on - strand at 3089.566 kb on - strand at 3089.593 kb on + strand at 3089.710 kb on + strand at 3089.710 kb on + strand at 3089.710 kb on + strand at 3089.711 kb on - strand at 3089.711 kb on - strand at 3089.711 kb on - strand at 3089.711 kb on - strand at 3089.711 kb on - strand at 3089.711 kb on - strand at 3089.820 kb on + strand, within AO356_13625 at 3089.820 kb on + strand, within AO356_13625 at 3089.820 kb on + strand, within AO356_13625 at 3089.821 kb on - strand, within AO356_13625 at 3089.821 kb on - strand, within AO356_13625 at 3089.821 kb on - strand, within AO356_13625 at 3089.892 kb on - strand, within AO356_13625 at 3090.183 kb on + strand, within AO356_13625 at 3090.183 kb on + strand, within AO356_13625 at 3090.183 kb on + strand, within AO356_13625 at 3090.208 kb on - strand, within AO356_13625 at 3090.208 kb on - strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.240 kb on + strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.241 kb on - strand, within AO356_13625 at 3090.433 kb on + strand, within AO356_13625 at 3090.433 kb on + strand, within AO356_13625 at 3090.433 kb on + strand, within AO356_13625 at 3090.433 kb on + strand, within AO356_13625 at 3090.433 kb on + strand, within AO356_13625 at 3090.433 kb on + strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.434 kb on - strand, within AO356_13625 at 3090.661 kb on + strand, within AO356_13625 at 3090.661 kb on + strand, within AO356_13625 at 3090.661 kb on + strand, within AO356_13625 at 3090.661 kb on + strand, within AO356_13625 at 3090.661 kb on + strand, within AO356_13625 at 3090.662 kb on - strand, within AO356_13625 at 3090.662 kb on - strand, within AO356_13625 at 3090.672 kb on + strand, within AO356_13625 at 3090.789 kb on - strand, within AO356_13625 at 3090.789 kb on - strand, within AO356_13625 at 3090.789 kb on - strand, within AO356_13625 at 3090.789 kb on - strand, within AO356_13625 at 3090.943 kb on + strand, within AO356_13625 at 3090.943 kb on + strand, within AO356_13625 at 3090.943 kb on + strand, within AO356_13625 at 3090.943 kb on + strand, within AO356_13625 at 3090.943 kb on + strand, within AO356_13625 at 3090.943 kb on + strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3090.944 kb on - strand, within AO356_13625 at 3091.175 kb on + strand, within AO356_13625 at 3091.175 kb on + strand, within AO356_13625 at 3091.175 kb on + strand, within AO356_13625 at 3091.176 kb on - strand, within AO356_13625 at 3091.176 kb on - strand, within AO356_13625 at 3091.226 kb on + strand, within AO356_13625 at 3091.307 kb on + strand at 3091.307 kb on + strand at 3091.307 kb on + strand at 3091.308 kb on - strand at 3091.354 kb on + strand at 3091.354 kb on + strand at 3091.355 kb on - strand at 3091.415 kb on + strand at 3091.415 kb on + strand at 3091.558 kb on + strand at 3091.558 kb on + strand at 3091.558 kb on + strand at 3091.558 kb on + strand at 3091.559 kb on - strand at 3091.559 kb on - strand at 3091.559 kb on - strand at 3091.559 kb on - strand at 3091.559 kb on - strand at 3091.572 kb on + strand at 3091.572 kb on + strand at 3091.572 kb on + strand at 3091.572 kb on + strand at 3091.573 kb on - strand at 3091.573 kb on - strand at 3091.620 kb on + strand at 3091.620 kb on + strand at 3091.620 kb on + strand at 3091.620 kb on + strand at 3091.620 kb on + strand at 3091.621 kb on - strand at 3091.621 kb on - strand at 3091.621 kb on - strand at 3091.638 kb on + strand at 3091.638 kb on + strand at 3091.638 kb on + strand at 3091.638 kb on + strand at 3091.639 kb on - strand at 3091.740 kb on + strand at 3091.741 kb on - strand at 3091.766 kb on + strand at 3091.766 kb on + strand at 3091.766 kb on + strand at 3091.773 kb on + strand at 3091.773 kb on + strand at 3091.774 kb on - strand at 3091.810 kb on + strand at 3091.810 kb on + strand at 3091.810 kb on + strand at 3091.810 kb on + strand at 3091.810 kb on + strand at 3091.810 kb on + strand at 3091.810 kb on + strand at 3091.811 kb on - strand at 3091.811 kb on - strand at 3091.811 kb on - strand at 3091.863 kb on - strand at 3091.917 kb on + strand at 3091.917 kb on + strand at 3091.918 kb on - strand at 3092.154 kb on + strand, within AO356_13630 at 3092.155 kb on - strand, within AO356_13630 at 3092.323 kb on + strand, within AO356_13630 at 3092.323 kb on + strand, within AO356_13630 at 3092.323 kb on + strand, within AO356_13630 at 3092.323 kb on + strand, within AO356_13630 at 3092.323 kb on + strand, within AO356_13630 at 3092.324 kb on - strand, within AO356_13630 at 3092.324 kb on - strand, within AO356_13630 at 3092.324 kb on - strand, within AO356_13630 at 3092.324 kb on - strand, within AO356_13630 at 3092.324 kb on - strand, within AO356_13630 at 3092.331 kb on + strand, within AO356_13630 at 3092.331 kb on + strand, within AO356_13630 at 3092.332 kb on - strand, within AO356_13630 at 3092.332 kb on - strand, within AO356_13630 at 3092.332 kb on - strand, within AO356_13630 at 3092.332 kb on - strand, within AO356_13630 at 3092.332 kb on - strand, within AO356_13630 at 3092.332 kb on - strand, within AO356_13630 at 3092.358 kb on + strand, within AO356_13630 at 3092.358 kb on + strand, within AO356_13630 at 3092.358 kb on + strand, within AO356_13630 at 3092.359 kb on - strand, within AO356_13630 at 3092.359 kb on - strand, within AO356_13630
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 3,088,682 + -0.0 3,088,682 + -0.6 3,088,683 - +0.2 3,088,683 - -1.0 3,088,683 - -0.9 3,088,686 + +1.2 3,088,686 + +0.2 3,088,686 + +0.1 3,088,687 - -0.0 3,088,687 - -1.3 3,088,687 - -0.6 3,088,687 - +0.2 3,088,687 - -0.2 3,088,713 + +0.7 3,088,713 + -0.1 3,088,713 + -1.1 3,088,713 + +1.1 3,088,713 + +0.8 3,088,714 - +1.2 3,088,714 - -0.2 3,088,714 - -0.7 3,088,714 - +1.1 3,088,714 - -0.7 3,088,714 - +0.2 3,088,978 + AO356_13620 0.30 +0.0 3,089,152 + AO356_13620 0.50 -0.3 3,089,152 + AO356_13620 0.50 +0.3 3,089,152 + AO356_13620 0.50 +0.3 3,089,152 + AO356_13620 0.50 -0.6 3,089,152 + AO356_13620 0.50 +0.1 3,089,152 + AO356_13620 0.50 +0.0 3,089,153 - AO356_13620 0.50 -0.2 3,089,153 - AO356_13620 0.50 -0.3 3,089,347 + AO356_13620 0.72 +1.5 3,089,347 + AO356_13620 0.72 +0.2 3,089,347 + AO356_13620 0.72 +0.5 3,089,347 + AO356_13620 0.72 +0.3 3,089,347 + AO356_13620 0.72 +0.8 3,089,348 - AO356_13620 0.72 +1.0 3,089,348 - AO356_13620 0.72 +0.3 3,089,348 - AO356_13620 0.72 -0.6 3,089,348 - AO356_13620 0.72 -0.4 3,089,348 - AO356_13620 0.72 +0.0 3,089,348 - AO356_13620 0.72 +0.2 3,089,348 - AO356_13620 0.72 -0.2 3,089,348 - AO356_13620 0.72 +1.1 3,089,348 - AO356_13620 0.72 -0.3 3,089,404 + AO356_13620 0.78 -1.7 3,089,405 - AO356_13620 0.78 -0.0 3,089,405 - AO356_13620 0.78 +0.5 3,089,490 + AO356_13620 0.88 +0.3 3,089,491 - AO356_13620 0.88 -0.1 3,089,565 + +0.3 3,089,565 + -0.4 3,089,565 + -0.7 3,089,566 - +0.5 3,089,566 - -0.7 3,089,566 - +0.2 3,089,566 - -0.0 3,089,593 + -0.8 3,089,710 + -1.9 3,089,710 + +1.1 3,089,710 + +0.1 3,089,711 - +0.2 3,089,711 - +0.9 3,089,711 - +1.0 3,089,711 - +0.5 3,089,711 - +0.3 3,089,711 - -0.3 3,089,820 + AO356_13625 0.10 -0.9 3,089,820 + AO356_13625 0.10 +1.4 3,089,820 + AO356_13625 0.10 +0.7 3,089,821 - AO356_13625 0.10 -0.1 3,089,821 - AO356_13625 0.10 -1.2 3,089,821 - AO356_13625 0.10 -0.2 3,089,892 - AO356_13625 0.14 +0.4 3,090,183 + AO356_13625 0.31 -0.5 3,090,183 + AO356_13625 0.31 -0.3 3,090,183 + AO356_13625 0.31 -0.9 3,090,208 - AO356_13625 0.32 +0.1 3,090,208 - AO356_13625 0.32 +0.7 3,090,240 + AO356_13625 0.34 +0.3 3,090,240 + AO356_13625 0.34 +0.1 3,090,240 + AO356_13625 0.34 +0.2 3,090,240 + AO356_13625 0.34 +0.2 3,090,240 + AO356_13625 0.34 +0.8 3,090,240 + AO356_13625 0.34 +1.1 3,090,240 + AO356_13625 0.34 -1.1 3,090,240 + AO356_13625 0.34 -0.4 3,090,241 - AO356_13625 0.34 +0.3 3,090,241 - AO356_13625 0.34 -1.6 3,090,241 - AO356_13625 0.34 -0.4 3,090,241 - AO356_13625 0.34 +0.2 3,090,241 - AO356_13625 0.34 +0.6 3,090,241 - AO356_13625 0.34 +0.4 3,090,241 - AO356_13625 0.34 +0.9 3,090,433 + AO356_13625 0.45 +0.0 3,090,433 + AO356_13625 0.45 -0.1 3,090,433 + AO356_13625 0.45 +0.0 3,090,433 + AO356_13625 0.45 +0.2 3,090,433 + AO356_13625 0.45 -0.5 3,090,433 + AO356_13625 0.45 -0.1 3,090,434 - AO356_13625 0.45 +0.6 3,090,434 - AO356_13625 0.45 +0.7 3,090,434 - AO356_13625 0.45 +0.4 3,090,434 - AO356_13625 0.45 -0.2 3,090,434 - AO356_13625 0.45 +1.8 3,090,434 - AO356_13625 0.45 +0.5 3,090,434 - AO356_13625 0.45 -1.4 3,090,661 + AO356_13625 0.58 +0.3 3,090,661 + AO356_13625 0.58 -0.8 3,090,661 + AO356_13625 0.58 +1.0 3,090,661 + AO356_13625 0.58 +0.9 3,090,661 + AO356_13625 0.58 +0.7 3,090,662 - AO356_13625 0.58 +2.2 3,090,662 - AO356_13625 0.58 -0.0 3,090,672 + AO356_13625 0.58 +0.3 3,090,789 - AO356_13625 0.65 -0.8 3,090,789 - AO356_13625 0.65 +0.2 3,090,789 - AO356_13625 0.65 -1.3 3,090,789 - AO356_13625 0.65 +0.7 3,090,943 + AO356_13625 0.73 +0.2 3,090,943 + AO356_13625 0.73 -0.2 3,090,943 + AO356_13625 0.73 +0.2 3,090,943 + AO356_13625 0.73 -0.9 3,090,943 + AO356_13625 0.73 +0.5 3,090,943 + AO356_13625 0.73 -0.4 3,090,944 - AO356_13625 0.74 +0.4 3,090,944 - AO356_13625 0.74 -0.1 3,090,944 - AO356_13625 0.74 -1.8 3,090,944 - AO356_13625 0.74 -0.3 3,090,944 - AO356_13625 0.74 -0.6 3,090,944 - AO356_13625 0.74 +1.0 3,090,944 - AO356_13625 0.74 -1.3 3,090,944 - AO356_13625 0.74 +0.0 3,090,944 - AO356_13625 0.74 -0.5 3,090,944 - AO356_13625 0.74 +0.2 3,090,944 - AO356_13625 0.74 +0.5 3,090,944 - AO356_13625 0.74 -0.9 3,091,175 + AO356_13625 0.86 -0.8 3,091,175 + AO356_13625 0.86 -1.8 3,091,175 + AO356_13625 0.86 -0.8 3,091,176 - AO356_13625 0.87 -0.8 3,091,176 - AO356_13625 0.87 +0.2 3,091,226 + AO356_13625 0.89 +1.1 3,091,307 + -0.6 3,091,307 + -0.7 3,091,307 + +0.1 3,091,308 - -0.6 3,091,354 + +0.3 3,091,354 + +0.5 3,091,355 - -1.1 3,091,415 + -0.2 3,091,415 + +0.7 3,091,558 + +0.3 3,091,558 + -2.3 3,091,558 + +0.8 3,091,558 + -0.8 3,091,559 - -0.8 3,091,559 - -0.3 3,091,559 - +0.6 3,091,559 - -1.2 3,091,559 - +1.5 3,091,572 + +1.0 3,091,572 + +0.5 3,091,572 + +1.0 3,091,572 + +0.0 3,091,573 - -1.0 3,091,573 - -1.1 3,091,620 + +0.4 3,091,620 + +0.7 3,091,620 + +0.4 3,091,620 + -1.2 3,091,620 + -0.4 3,091,621 - +0.4 3,091,621 - -0.5 3,091,621 - -0.9 3,091,638 + +1.3 3,091,638 + -0.9 3,091,638 + +0.5 3,091,638 + +0.3 3,091,639 - -1.2 3,091,740 + -1.5 3,091,741 - +0.0 3,091,766 + +0.1 3,091,766 + +1.2 3,091,766 + -0.3 3,091,773 + +0.5 3,091,773 + +0.3 3,091,774 - -0.5 3,091,810 + +0.1 3,091,810 + -0.3 3,091,810 + +1.2 3,091,810 + -1.1 3,091,810 + -0.4 3,091,810 + +0.2 3,091,810 + +1.1 3,091,811 - +0.3 3,091,811 - -0.1 3,091,811 - +1.1 3,091,863 - -0.7 3,091,917 + -1.4 3,091,917 + -1.5 3,091,918 - -1.2 3,092,154 + AO356_13630 0.28 -0.4 3,092,155 - AO356_13630 0.29 +0.1 3,092,323 + AO356_13630 0.43 +0.7 3,092,323 + AO356_13630 0.43 -2.0 3,092,323 + AO356_13630 0.43 -0.8 3,092,323 + AO356_13630 0.43 -0.5 3,092,323 + AO356_13630 0.43 -1.3 3,092,324 - AO356_13630 0.43 +1.2 3,092,324 - AO356_13630 0.43 +0.8 3,092,324 - AO356_13630 0.43 +2.2 3,092,324 - AO356_13630 0.43 +2.0 3,092,324 - AO356_13630 0.43 +0.4 3,092,331 + AO356_13630 0.44 -1.2 3,092,331 + AO356_13630 0.44 +0.2 3,092,332 - AO356_13630 0.44 +0.4 3,092,332 - AO356_13630 0.44 -1.0 3,092,332 - AO356_13630 0.44 +1.4 3,092,332 - AO356_13630 0.44 +0.3 3,092,332 - AO356_13630 0.44 +0.7 3,092,332 - AO356_13630 0.44 +0.7 3,092,358 + AO356_13630 0.46 -0.0 3,092,358 + AO356_13630 0.46 -0.4 3,092,358 + AO356_13630 0.46 +0.2 3,092,359 - AO356_13630 0.46 -0.6 3,092,359 - AO356_13630 0.46 +1.6
Or see this region's nucleotide sequence