Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08790 and AO356_08795 overlap by 10 nucleotides AO356_08795 and AO356_08800 are separated by 214 nucleotides AO356_08800 and AO356_08805 overlap by 32 nucleotides
AO356_08790: AO356_08790 - cytoplasmic protein, at 1,981,646 to 1,982,098
_08790
AO356_08795: AO356_08795 - ADP-ribose pyrophosphatase, at 1,982,089 to 1,982,706
_08795
AO356_08800: AO356_08800 - hypothetical protein, at 1,982,921 to 1,983,664
_08800
AO356_08805: AO356_08805 - nitrate reductase, at 1,983,633 to 1,984,925
_08805
Position (kb)
1982
1983
1984 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.026 kb on - strand, within AO356_08790 at 1982.026 kb on - strand, within AO356_08790 at 1982.098 kb on + strand at 1982.099 kb on - strand at 1982.166 kb on + strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.296 kb on + strand, within AO356_08795 at 1982.330 kb on + strand, within AO356_08795 at 1982.331 kb on - strand, within AO356_08795 at 1982.331 kb on - strand, within AO356_08795 at 1982.631 kb on + strand, within AO356_08795 at 1982.631 kb on + strand, within AO356_08795 at 1982.631 kb on + strand, within AO356_08795 at 1982.633 kb on + strand, within AO356_08795 at 1982.633 kb on + strand, within AO356_08795 at 1982.633 kb on + strand, within AO356_08795 at 1982.633 kb on + strand, within AO356_08795 at 1982.633 kb on + strand, within AO356_08795 at 1982.633 kb on + strand, within AO356_08795 at 1982.634 kb on - strand, within AO356_08795 at 1982.634 kb on - strand, within AO356_08795 at 1982.634 kb on - strand, within AO356_08795 at 1982.634 kb on - strand, within AO356_08795 at 1982.634 kb on - strand, within AO356_08795 at 1982.634 kb on - strand, within AO356_08795 at 1982.733 kb on + strand at 1982.733 kb on + strand at 1982.733 kb on + strand at 1982.733 kb on + strand at 1982.733 kb on + strand at 1982.733 kb on + strand at 1982.734 kb on - strand at 1982.766 kb on - strand at 1982.766 kb on - strand at 1982.766 kb on - strand at 1982.766 kb on - strand at 1982.776 kb on + strand at 1982.836 kb on + strand at 1982.836 kb on + strand at 1982.836 kb on + strand at 1982.836 kb on + strand at 1982.836 kb on + strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.837 kb on - strand at 1982.839 kb on + strand at 1982.845 kb on + strand at 1982.846 kb on - strand at 1982.999 kb on + strand, within AO356_08800 at 1982.999 kb on + strand, within AO356_08800 at 1982.999 kb on + strand, within AO356_08800 at 1983.000 kb on - strand, within AO356_08800 at 1983.239 kb on + strand, within AO356_08800 at 1983.239 kb on + strand, within AO356_08800 at 1983.240 kb on - strand, within AO356_08800 at 1983.240 kb on - strand, within AO356_08800 at 1983.240 kb on - strand, within AO356_08800 at 1983.240 kb on - strand, within AO356_08800 at 1983.240 kb on - strand, within AO356_08800 at 1983.256 kb on - strand, within AO356_08800 at 1983.256 kb on - strand, within AO356_08800 at 1983.256 kb on - strand, within AO356_08800 at 1983.299 kb on + strand, within AO356_08800 at 1983.299 kb on + strand, within AO356_08800 at 1983.299 kb on + strand, within AO356_08800 at 1983.350 kb on + strand, within AO356_08800 at 1983.350 kb on + strand, within AO356_08800 at 1983.351 kb on - strand, within AO356_08800 at 1983.533 kb on + strand, within AO356_08800 at 1983.534 kb on - strand, within AO356_08800 at 1983.534 kb on - strand, within AO356_08800 at 1983.554 kb on + strand, within AO356_08800 at 1983.554 kb on + strand, within AO356_08800 at 1983.554 kb on + strand, within AO356_08800 at 1983.555 kb on - strand, within AO356_08800 at 1983.757 kb on + strand at 1983.757 kb on + strand at 1983.757 kb on + strand at 1983.758 kb on - strand at 1983.758 kb on - strand at 1983.758 kb on - strand at 1983.758 kb on - strand at 1983.758 kb on - strand at 1983.758 kb on - strand at 1983.913 kb on + strand, within AO356_08805 at 1983.913 kb on + strand, within AO356_08805 at 1984.150 kb on + strand, within AO356_08805 at 1984.150 kb on + strand, within AO356_08805 at 1984.151 kb on - strand, within AO356_08805 at 1984.151 kb on - strand, within AO356_08805 at 1984.247 kb on - strand, within AO356_08805 at 1984.287 kb on - strand, within AO356_08805
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,982,025 + AO356_08790 0.84 +0.6 1,982,025 + AO356_08790 0.84 +0.1 1,982,025 + AO356_08790 0.84 -0.6 1,982,025 + AO356_08790 0.84 +0.4 1,982,025 + AO356_08790 0.84 -0.9 1,982,025 + AO356_08790 0.84 -0.1 1,982,026 - AO356_08790 0.84 +0.2 1,982,026 - AO356_08790 0.84 +0.7 1,982,098 + +2.2 1,982,099 - -0.7 1,982,166 + AO356_08795 0.12 -0.4 1,982,167 - AO356_08795 0.13 +0.0 1,982,167 - AO356_08795 0.13 +0.4 1,982,167 - AO356_08795 0.13 +0.8 1,982,167 - AO356_08795 0.13 +0.3 1,982,167 - AO356_08795 0.13 -1.5 1,982,167 - AO356_08795 0.13 -0.5 1,982,167 - AO356_08795 0.13 +1.1 1,982,167 - AO356_08795 0.13 +0.5 1,982,296 + AO356_08795 0.33 +0.7 1,982,330 + AO356_08795 0.39 +0.2 1,982,331 - AO356_08795 0.39 +0.8 1,982,331 - AO356_08795 0.39 +1.7 1,982,631 + AO356_08795 0.88 +0.2 1,982,631 + AO356_08795 0.88 +1.1 1,982,631 + AO356_08795 0.88 -0.3 1,982,633 + AO356_08795 0.88 -0.1 1,982,633 + AO356_08795 0.88 +1.8 1,982,633 + AO356_08795 0.88 -0.5 1,982,633 + AO356_08795 0.88 +0.4 1,982,633 + AO356_08795 0.88 +0.7 1,982,633 + AO356_08795 0.88 +0.9 1,982,634 - AO356_08795 0.88 -0.7 1,982,634 - AO356_08795 0.88 -0.4 1,982,634 - AO356_08795 0.88 +0.4 1,982,634 - AO356_08795 0.88 -0.4 1,982,634 - AO356_08795 0.88 +1.0 1,982,634 - AO356_08795 0.88 +0.9 1,982,733 + +0.5 1,982,733 + -0.9 1,982,733 + -0.2 1,982,733 + +1.1 1,982,733 + +1.0 1,982,733 + -0.3 1,982,734 - +0.6 1,982,766 - -0.4 1,982,766 - +0.1 1,982,766 - -0.3 1,982,766 - -2.4 1,982,776 + -0.5 1,982,836 + -0.4 1,982,836 + +0.9 1,982,836 + +0.7 1,982,836 + -0.2 1,982,836 + -0.7 1,982,837 - -0.0 1,982,837 - +0.4 1,982,837 - -0.2 1,982,837 - +0.3 1,982,837 - +0.9 1,982,837 - -2.3 1,982,837 - -1.3 1,982,837 - -0.3 1,982,839 + -0.8 1,982,845 + +1.7 1,982,846 - -1.3 1,982,999 + AO356_08800 0.10 -2.8 1,982,999 + AO356_08800 0.10 -2.6 1,982,999 + AO356_08800 0.10 -1.1 1,983,000 - AO356_08800 0.11 -1.4 1,983,239 + AO356_08800 0.43 -0.7 1,983,239 + AO356_08800 0.43 -0.8 1,983,240 - AO356_08800 0.43 -1.1 1,983,240 - AO356_08800 0.43 -3.3 1,983,240 - AO356_08800 0.43 -2.4 1,983,240 - AO356_08800 0.43 -0.8 1,983,240 - AO356_08800 0.43 -3.0 1,983,256 - AO356_08800 0.45 -1.9 1,983,256 - AO356_08800 0.45 -3.1 1,983,256 - AO356_08800 0.45 -2.1 1,983,299 + AO356_08800 0.51 -1.7 1,983,299 + AO356_08800 0.51 -1.6 1,983,299 + AO356_08800 0.51 -1.0 1,983,350 + AO356_08800 0.58 -3.5 1,983,350 + AO356_08800 0.58 -3.5 1,983,351 - AO356_08800 0.58 -3.0 1,983,533 + AO356_08800 0.82 -1.4 1,983,534 - AO356_08800 0.82 -0.6 1,983,534 - AO356_08800 0.82 -3.4 1,983,554 + AO356_08800 0.85 -1.0 1,983,554 + AO356_08800 0.85 -3.3 1,983,554 + AO356_08800 0.85 -2.5 1,983,555 - AO356_08800 0.85 -0.7 1,983,757 + -0.6 1,983,757 + -0.5 1,983,757 + +0.7 1,983,758 - -1.1 1,983,758 - -1.7 1,983,758 - +0.2 1,983,758 - +1.7 1,983,758 - +0.4 1,983,758 - +0.0 1,983,913 + AO356_08805 0.22 +0.1 1,983,913 + AO356_08805 0.22 +0.5 1,984,150 + AO356_08805 0.40 -0.1 1,984,150 + AO356_08805 0.40 -0.5 1,984,151 - AO356_08805 0.40 +0.6 1,984,151 - AO356_08805 0.40 -1.3 1,984,247 - AO356_08805 0.47 +0.2 1,984,287 - AO356_08805 0.51 +0.5
Or see this region's nucleotide sequence