Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07705 and AO356_07710 overlap by 4 nucleotides AO356_07710 and AO356_07715 overlap by 4 nucleotides AO356_07715 and AO356_07720 overlap by 4 nucleotides AO356_07720 and AO356_07725 are separated by 28 nucleotides
AO356_07705: AO356_07705 - ABC transporter permease, at 1,711,834 to 1,712,781
_07705
AO356_07710: AO356_07710 - nickel ABC transporter permease, at 1,712,778 to 1,713,635
_07710
AO356_07715: AO356_07715 - methionine ABC transporter ATP-binding protein, at 1,713,632 to 1,714,618
_07715
AO356_07720: AO356_07720 - ABC transporter ATP-binding protein, at 1,714,615 to 1,715,586
_07720
AO356_07725: AO356_07725 - diguanylate cyclase, at 1,715,615 to 1,717,129
_07725
Position (kb)
1713
1714
1715 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1712.671 kb on + strand, within AO356_07705 at 1712.671 kb on + strand, within AO356_07705 at 1712.671 kb on + strand, within AO356_07705 at 1712.671 kb on + strand, within AO356_07705 at 1712.672 kb on - strand, within AO356_07705 at 1712.946 kb on - strand, within AO356_07710 at 1713.111 kb on + strand, within AO356_07710 at 1713.111 kb on + strand, within AO356_07710 at 1713.112 kb on - strand, within AO356_07710 at 1713.156 kb on - strand, within AO356_07710 at 1713.158 kb on + strand, within AO356_07710 at 1713.158 kb on + strand, within AO356_07710 at 1713.231 kb on + strand, within AO356_07710 at 1713.231 kb on + strand, within AO356_07710 at 1713.231 kb on + strand, within AO356_07710 at 1713.232 kb on - strand, within AO356_07710 at 1713.232 kb on - strand, within AO356_07710 at 1713.264 kb on + strand, within AO356_07710 at 1713.264 kb on + strand, within AO356_07710 at 1713.264 kb on + strand, within AO356_07710 at 1713.265 kb on - strand, within AO356_07710 at 1713.265 kb on - strand, within AO356_07710 at 1713.265 kb on - strand, within AO356_07710 at 1713.427 kb on + strand, within AO356_07710 at 1713.453 kb on + strand, within AO356_07710 at 1713.454 kb on - strand, within AO356_07710 at 1713.454 kb on - strand, within AO356_07710 at 1713.987 kb on + strand, within AO356_07715 at 1713.987 kb on + strand, within AO356_07715 at 1713.988 kb on - strand, within AO356_07715 at 1714.045 kb on - strand, within AO356_07715 at 1714.204 kb on - strand, within AO356_07715 at 1714.204 kb on - strand, within AO356_07715 at 1714.322 kb on + strand, within AO356_07715 at 1714.322 kb on + strand, within AO356_07715 at 1714.323 kb on - strand, within AO356_07715 at 1714.323 kb on - strand, within AO356_07715 at 1714.386 kb on - strand, within AO356_07715 at 1714.386 kb on - strand, within AO356_07715 at 1714.388 kb on - strand, within AO356_07715 at 1714.918 kb on + strand, within AO356_07720 at 1714.918 kb on + strand, within AO356_07720 at 1714.919 kb on - strand, within AO356_07720 at 1714.919 kb on - strand, within AO356_07720 at 1714.920 kb on + strand, within AO356_07720 at 1714.920 kb on + strand, within AO356_07720 at 1714.921 kb on - strand, within AO356_07720 at 1715.299 kb on + strand, within AO356_07720 at 1715.300 kb on - strand, within AO356_07720 at 1715.300 kb on - strand, within AO356_07720 at 1715.300 kb on - strand, within AO356_07720 at 1715.362 kb on + strand, within AO356_07720 at 1715.362 kb on + strand, within AO356_07720 at 1715.362 kb on + strand, within AO356_07720 at 1715.362 kb on + strand, within AO356_07720 at 1715.362 kb on + strand, within AO356_07720 at 1715.363 kb on - strand, within AO356_07720 at 1715.363 kb on - strand, within AO356_07720 at 1715.363 kb on - strand, within AO356_07720 at 1715.365 kb on - strand, within AO356_07720 at 1715.365 kb on - strand, within AO356_07720 at 1715.365 kb on - strand, within AO356_07720 at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.556 kb on + strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.557 kb on - strand at 1715.601 kb on + strand at 1715.601 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,712,671 + AO356_07705 0.88 -0.2 1,712,671 + AO356_07705 0.88 -0.1 1,712,671 + AO356_07705 0.88 +0.3 1,712,671 + AO356_07705 0.88 -0.2 1,712,672 - AO356_07705 0.88 -0.9 1,712,946 - AO356_07710 0.20 +0.9 1,713,111 + AO356_07710 0.39 -0.5 1,713,111 + AO356_07710 0.39 -0.4 1,713,112 - AO356_07710 0.39 -0.3 1,713,156 - AO356_07710 0.44 -0.5 1,713,158 + AO356_07710 0.44 -1.7 1,713,158 + AO356_07710 0.44 +0.6 1,713,231 + AO356_07710 0.53 -0.1 1,713,231 + AO356_07710 0.53 +0.2 1,713,231 + AO356_07710 0.53 -1.0 1,713,232 - AO356_07710 0.53 +0.8 1,713,232 - AO356_07710 0.53 -0.1 1,713,264 + AO356_07710 0.57 +0.5 1,713,264 + AO356_07710 0.57 +1.9 1,713,264 + AO356_07710 0.57 +0.5 1,713,265 - AO356_07710 0.57 -1.8 1,713,265 - AO356_07710 0.57 +1.0 1,713,265 - AO356_07710 0.57 -0.0 1,713,427 + AO356_07710 0.76 -1.1 1,713,453 + AO356_07710 0.79 +0.4 1,713,454 - AO356_07710 0.79 +0.2 1,713,454 - AO356_07710 0.79 +0.6 1,713,987 + AO356_07715 0.36 -0.7 1,713,987 + AO356_07715 0.36 -1.6 1,713,988 - AO356_07715 0.36 +0.8 1,714,045 - AO356_07715 0.42 -0.9 1,714,204 - AO356_07715 0.58 -0.9 1,714,204 - AO356_07715 0.58 -0.7 1,714,322 + AO356_07715 0.70 -0.2 1,714,322 + AO356_07715 0.70 -0.2 1,714,323 - AO356_07715 0.70 -0.4 1,714,323 - AO356_07715 0.70 -1.7 1,714,386 - AO356_07715 0.76 +0.1 1,714,386 - AO356_07715 0.76 +0.9 1,714,388 - AO356_07715 0.77 -1.0 1,714,918 + AO356_07720 0.31 +1.1 1,714,918 + AO356_07720 0.31 -0.2 1,714,919 - AO356_07720 0.31 +0.6 1,714,919 - AO356_07720 0.31 +0.5 1,714,920 + AO356_07720 0.31 -1.8 1,714,920 + AO356_07720 0.31 -0.3 1,714,921 - AO356_07720 0.31 +1.0 1,715,299 + AO356_07720 0.70 -0.4 1,715,300 - AO356_07720 0.70 -0.1 1,715,300 - AO356_07720 0.70 +0.1 1,715,300 - AO356_07720 0.70 +0.7 1,715,362 + AO356_07720 0.77 -0.0 1,715,362 + AO356_07720 0.77 +0.6 1,715,362 + AO356_07720 0.77 -1.0 1,715,362 + AO356_07720 0.77 +0.4 1,715,362 + AO356_07720 0.77 +0.0 1,715,363 - AO356_07720 0.77 -0.0 1,715,363 - AO356_07720 0.77 +0.6 1,715,363 - AO356_07720 0.77 -0.6 1,715,365 - AO356_07720 0.77 -1.0 1,715,365 - AO356_07720 0.77 -0.5 1,715,365 - AO356_07720 0.77 -0.1 1,715,556 + -0.1 1,715,556 + -0.3 1,715,556 + -0.1 1,715,556 + -0.8 1,715,556 + -1.0 1,715,556 + -3.1 1,715,556 + +0.5 1,715,556 + +0.7 1,715,556 + -0.4 1,715,557 - -1.8 1,715,557 - -0.3 1,715,557 - -0.3 1,715,557 - +0.5 1,715,557 - +0.1 1,715,557 - -0.2 1,715,557 - -0.3 1,715,557 - +0.1 1,715,557 - -0.0 1,715,557 - +0.0 1,715,557 - -0.0 1,715,601 + -0.1 1,715,601 + +0.3
Or see this region's nucleotide sequence