Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06935 and AO356_06940 are separated by 45 nucleotides AO356_06940 and AO356_06945 are separated by 261 nucleotides AO356_06945 and AO356_06950 are separated by 126 nucleotides
AO356_06935: AO356_06935 - glycerate dehydrogenase, at 1,533,857 to 1,534,822
_06935
AO356_06940: AO356_06940 - 16S rRNA methyltransferase, at 1,534,868 to 1,535,866
_06940
AO356_06945: AO356_06945 - hypothetical protein, at 1,536,128 to 1,536,712
_06945
AO356_06950: AO356_06950 - peptidase M48, at 1,536,839 to 1,537,654
_06950
Position (kb)
1534
1535
1536 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1534.097 kb on - strand, within AO356_06935 at 1534.452 kb on + strand, within AO356_06935 at 1534.799 kb on - strand at 1534.852 kb on + strand at 1534.852 kb on + strand at 1534.852 kb on + strand at 1534.853 kb on - strand at 1534.887 kb on + strand at 1534.887 kb on + strand at 1534.888 kb on - strand at 1534.888 kb on - strand at 1534.888 kb on - strand at 1534.908 kb on + strand at 1535.118 kb on - strand, within AO356_06940 at 1535.162 kb on + strand, within AO356_06940 at 1535.162 kb on + strand, within AO356_06940 at 1535.162 kb on + strand, within AO356_06940 at 1535.163 kb on - strand, within AO356_06940 at 1535.163 kb on - strand, within AO356_06940 at 1535.163 kb on - strand, within AO356_06940 at 1535.325 kb on - strand, within AO356_06940 at 1535.325 kb on - strand, within AO356_06940 at 1535.535 kb on + strand, within AO356_06940 at 1535.535 kb on + strand, within AO356_06940 at 1535.846 kb on + strand at 1535.847 kb on - strand at 1535.847 kb on - strand at 1535.875 kb on - strand at 1535.884 kb on + strand at 1535.884 kb on + strand at 1535.885 kb on - strand at 1535.885 kb on - strand at 1535.885 kb on - strand at 1535.907 kb on - strand at 1535.928 kb on - strand at 1535.935 kb on + strand at 1535.935 kb on + strand at 1535.935 kb on + strand at 1535.936 kb on - strand at 1535.936 kb on - strand at 1535.936 kb on - strand at 1535.967 kb on + strand at 1535.967 kb on + strand at 1535.968 kb on - strand at 1535.968 kb on - strand at 1535.968 kb on - strand at 1535.977 kb on + strand at 1535.977 kb on + strand at 1535.977 kb on + strand at 1535.977 kb on + strand at 1535.977 kb on + strand at 1535.977 kb on + strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1535.978 kb on - strand at 1536.001 kb on - strand at 1536.048 kb on + strand at 1536.049 kb on - strand at 1536.049 kb on - strand at 1536.049 kb on - strand at 1536.049 kb on - strand at 1536.084 kb on + strand at 1536.084 kb on + strand at 1536.084 kb on + strand at 1536.084 kb on + strand at 1536.084 kb on + strand at 1536.085 kb on - strand at 1536.085 kb on - strand at 1536.094 kb on - strand at 1536.147 kb on + strand at 1536.147 kb on + strand at 1536.148 kb on - strand at 1536.151 kb on + strand at 1536.151 kb on + strand at 1536.151 kb on + strand at 1536.152 kb on - strand at 1536.152 kb on - strand at 1536.152 kb on - strand at 1536.680 kb on + strand at 1536.680 kb on + strand at 1536.681 kb on - strand at 1536.681 kb on - strand at 1536.697 kb on + strand at 1536.698 kb on - strand at 1536.698 kb on - strand at 1536.698 kb on - strand at 1536.698 kb on - strand at 1536.740 kb on - strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.753 kb on + strand at 1536.754 kb on - strand at 1536.754 kb on - strand at 1536.754 kb on - strand at 1536.754 kb on - strand at 1536.754 kb on - strand at 1536.840 kb on + strand at 1536.840 kb on + strand at 1536.840 kb on + strand at 1536.840 kb on + strand at 1536.840 kb on + strand at 1536.840 kb on + strand at 1536.840 kb on + strand at 1536.841 kb on - strand at 1536.841 kb on - strand at 1536.841 kb on - strand at 1536.858 kb on + strand at 1536.859 kb on - strand at 1536.859 kb on - strand at 1536.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,534,097 - AO356_06935 0.25 -1.6 1,534,452 + AO356_06935 0.62 -0.3 1,534,799 - -0.7 1,534,852 + -0.5 1,534,852 + +0.1 1,534,852 + +0.1 1,534,853 - -0.2 1,534,887 + +0.4 1,534,887 + +0.9 1,534,888 - -0.9 1,534,888 - +0.3 1,534,888 - +2.1 1,534,908 + +0.3 1,535,118 - AO356_06940 0.25 +1.5 1,535,162 + AO356_06940 0.29 +0.4 1,535,162 + AO356_06940 0.29 +0.5 1,535,162 + AO356_06940 0.29 -0.4 1,535,163 - AO356_06940 0.30 +0.4 1,535,163 - AO356_06940 0.30 -0.5 1,535,163 - AO356_06940 0.30 -0.8 1,535,325 - AO356_06940 0.46 +0.6 1,535,325 - AO356_06940 0.46 +0.7 1,535,535 + AO356_06940 0.67 +0.3 1,535,535 + AO356_06940 0.67 +0.6 1,535,846 + +1.7 1,535,847 - -0.2 1,535,847 - +0.5 1,535,875 - +1.1 1,535,884 + -1.0 1,535,884 + -1.0 1,535,885 - -0.9 1,535,885 - -0.2 1,535,885 - +0.3 1,535,907 - -0.4 1,535,928 - +0.5 1,535,935 + +1.3 1,535,935 + +0.3 1,535,935 + +0.5 1,535,936 - +1.1 1,535,936 - -0.0 1,535,936 - -0.3 1,535,967 + -1.0 1,535,967 + +1.1 1,535,968 - +1.3 1,535,968 - +1.0 1,535,968 - -2.2 1,535,977 + +0.2 1,535,977 + -0.2 1,535,977 + -0.8 1,535,977 + -0.1 1,535,977 + +0.7 1,535,977 + -0.8 1,535,978 - +0.1 1,535,978 - -1.2 1,535,978 - -0.1 1,535,978 - +0.9 1,535,978 - +0.1 1,535,978 - +0.4 1,535,978 - -0.9 1,535,978 - -0.6 1,535,978 - +0.8 1,535,978 - +0.9 1,536,001 - +0.2 1,536,048 + +0.1 1,536,049 - +1.7 1,536,049 - +0.7 1,536,049 - +2.1 1,536,049 - -0.6 1,536,084 + +0.2 1,536,084 + +0.5 1,536,084 + +0.9 1,536,084 + -0.2 1,536,084 + +0.0 1,536,085 - -0.3 1,536,085 - +0.1 1,536,094 - -0.0 1,536,147 + -0.8 1,536,147 + -0.3 1,536,148 - -0.2 1,536,151 + -0.3 1,536,151 + +0.6 1,536,151 + +0.1 1,536,152 - -1.6 1,536,152 - +0.2 1,536,152 - +0.1 1,536,680 + -0.5 1,536,680 + +1.5 1,536,681 - +0.1 1,536,681 - -0.1 1,536,697 + -0.8 1,536,698 - +0.6 1,536,698 - +0.9 1,536,698 - +0.1 1,536,698 - +0.1 1,536,740 - +0.3 1,536,753 + -0.2 1,536,753 + +0.5 1,536,753 + -1.2 1,536,753 + -0.4 1,536,753 + +0.5 1,536,753 + +0.1 1,536,753 + +0.1 1,536,753 + -0.1 1,536,753 + +0.8 1,536,753 + +0.1 1,536,753 + +0.5 1,536,753 + +0.0 1,536,753 + +0.0 1,536,753 + -0.5 1,536,753 + -2.2 1,536,753 + -1.2 1,536,754 - +0.4 1,536,754 - +0.5 1,536,754 - +0.5 1,536,754 - -0.4 1,536,754 - -0.7 1,536,840 + -0.3 1,536,840 + +0.9 1,536,840 + +0.5 1,536,840 + -0.9 1,536,840 + +0.6 1,536,840 + +0.7 1,536,840 + +0.1 1,536,841 - -1.6 1,536,841 - -0.2 1,536,841 - +0.5 1,536,858 + -0.7 1,536,859 - +0.0 1,536,859 - +0.5 1,536,859 - -1.2
Or see this region's nucleotide sequence