Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06925 and AO356_06930 are separated by 46 nucleotides AO356_06930 and AO356_06935 are separated by 147 nucleotides AO356_06935 and AO356_06940 are separated by 45 nucleotides
AO356_06925: AO356_06925 - acetyltransferase, at 1,532,617 to 1,533,033
_06925
AO356_06930: AO356_06930 - lysine transporter LysE, at 1,533,080 to 1,533,709
_06930
AO356_06935: AO356_06935 - glycerate dehydrogenase, at 1,533,857 to 1,534,822
_06935
AO356_06940: AO356_06940 - 16S rRNA methyltransferase, at 1,534,868 to 1,535,866
_06940
Position (kb)
1533
1534
1535 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1533.243 kb on + strand, within AO356_06930 at 1533.243 kb on + strand, within AO356_06930 at 1533.244 kb on - strand, within AO356_06930 at 1533.244 kb on - strand, within AO356_06930 at 1533.277 kb on + strand, within AO356_06930 at 1533.277 kb on + strand, within AO356_06930 at 1533.456 kb on + strand, within AO356_06930 at 1533.456 kb on + strand, within AO356_06930 at 1533.456 kb on + strand, within AO356_06930 at 1533.457 kb on - strand, within AO356_06930 at 1533.457 kb on - strand, within AO356_06930 at 1533.465 kb on + strand, within AO356_06930 at 1533.465 kb on + strand, within AO356_06930 at 1533.465 kb on + strand, within AO356_06930 at 1533.466 kb on - strand, within AO356_06930 at 1533.466 kb on - strand, within AO356_06930 at 1533.544 kb on - strand, within AO356_06930 at 1533.705 kb on + strand at 1533.705 kb on + strand at 1533.721 kb on - strand at 1533.808 kb on + strand at 1533.822 kb on + strand at 1533.822 kb on + strand at 1533.822 kb on + strand at 1533.822 kb on + strand at 1533.823 kb on - strand at 1533.823 kb on - strand at 1533.823 kb on - strand at 1533.842 kb on + strand at 1533.842 kb on + strand at 1533.842 kb on + strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.849 kb on + strand at 1533.849 kb on + strand at 1533.850 kb on - strand at 1534.097 kb on - strand, within AO356_06935 at 1534.452 kb on + strand, within AO356_06935 at 1534.799 kb on - strand at 1534.852 kb on + strand at 1534.852 kb on + strand at 1534.852 kb on + strand at 1534.853 kb on - strand at 1534.887 kb on + strand at 1534.887 kb on + strand at 1534.888 kb on - strand at 1534.888 kb on - strand at 1534.888 kb on - strand at 1534.908 kb on + strand at 1535.118 kb on - strand, within AO356_06940 at 1535.162 kb on + strand, within AO356_06940 at 1535.162 kb on + strand, within AO356_06940 at 1535.162 kb on + strand, within AO356_06940 at 1535.163 kb on - strand, within AO356_06940 at 1535.163 kb on - strand, within AO356_06940 at 1535.163 kb on - strand, within AO356_06940 at 1535.325 kb on - strand, within AO356_06940 at 1535.325 kb on - strand, within AO356_06940 at 1535.535 kb on + strand, within AO356_06940 at 1535.535 kb on + strand, within AO356_06940
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,533,243 + AO356_06930 0.26 +0.1 1,533,243 + AO356_06930 0.26 -2.5 1,533,244 - AO356_06930 0.26 +0.2 1,533,244 - AO356_06930 0.26 -0.3 1,533,277 + AO356_06930 0.31 +0.9 1,533,277 + AO356_06930 0.31 +0.5 1,533,456 + AO356_06930 0.60 +1.1 1,533,456 + AO356_06930 0.60 +0.5 1,533,456 + AO356_06930 0.60 +0.0 1,533,457 - AO356_06930 0.60 +0.9 1,533,457 - AO356_06930 0.60 -0.7 1,533,465 + AO356_06930 0.61 -0.0 1,533,465 + AO356_06930 0.61 +0.3 1,533,465 + AO356_06930 0.61 -0.6 1,533,466 - AO356_06930 0.61 +0.3 1,533,466 - AO356_06930 0.61 +0.8 1,533,544 - AO356_06930 0.74 +1.0 1,533,705 + -0.2 1,533,705 + -0.4 1,533,721 - -0.0 1,533,808 + -0.5 1,533,822 + -0.5 1,533,822 + -0.1 1,533,822 + +0.4 1,533,822 + -1.1 1,533,823 - -0.1 1,533,823 - -0.4 1,533,823 - +0.1 1,533,842 + +1.4 1,533,842 + -0.1 1,533,842 + +0.2 1,533,843 - +0.3 1,533,843 - -0.1 1,533,843 - -0.1 1,533,843 - +0.8 1,533,843 - -0.3 1,533,843 - +0.1 1,533,843 - +1.3 1,533,849 + -1.0 1,533,849 + +0.1 1,533,850 - -0.1 1,534,097 - AO356_06935 0.25 -1.6 1,534,452 + AO356_06935 0.62 -0.3 1,534,799 - -0.7 1,534,852 + -0.5 1,534,852 + +0.1 1,534,852 + +0.1 1,534,853 - -0.2 1,534,887 + +0.4 1,534,887 + +0.9 1,534,888 - -0.9 1,534,888 - +0.3 1,534,888 - +2.1 1,534,908 + +0.3 1,535,118 - AO356_06940 0.25 +1.5 1,535,162 + AO356_06940 0.29 +0.4 1,535,162 + AO356_06940 0.29 +0.5 1,535,162 + AO356_06940 0.29 -0.4 1,535,163 - AO356_06940 0.30 +0.4 1,535,163 - AO356_06940 0.30 -0.5 1,535,163 - AO356_06940 0.30 -0.8 1,535,325 - AO356_06940 0.46 +0.6 1,535,325 - AO356_06940 0.46 +0.7 1,535,535 + AO356_06940 0.67 +0.3 1,535,535 + AO356_06940 0.67 +0.6
Or see this region's nucleotide sequence