Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06915 and AO356_06920 overlap by 4 nucleotides AO356_06920 and AO356_06925 overlap by 70 nucleotides AO356_06925 and AO356_06930 are separated by 46 nucleotides AO356_06930 and AO356_06935 are separated by 147 nucleotides
AO356_06915: AO356_06915 - glycosyl transferase, at 1,531,383 to 1,532,297
_06915
AO356_06920: AO356_06920 - hypothetical protein, at 1,532,294 to 1,532,686
_06920
AO356_06925: AO356_06925 - acetyltransferase, at 1,532,617 to 1,533,033
_06925
AO356_06930: AO356_06930 - lysine transporter LysE, at 1,533,080 to 1,533,709
_06930
AO356_06935: AO356_06935 - glycerate dehydrogenase, at 1,533,857 to 1,534,822
_06935
Position (kb)
1533
1534 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1532.136 kb on - strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.400 kb on - strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.477 kb on + strand, within AO356_06920 at 1532.477 kb on + strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.479 kb on + strand, within AO356_06920 at 1532.479 kb on + strand, within AO356_06920 at 1532.479 kb on + strand, within AO356_06920 at 1532.480 kb on - strand, within AO356_06920 at 1533.243 kb on + strand, within AO356_06930 at 1533.243 kb on + strand, within AO356_06930 at 1533.244 kb on - strand, within AO356_06930 at 1533.244 kb on - strand, within AO356_06930 at 1533.277 kb on + strand, within AO356_06930 at 1533.277 kb on + strand, within AO356_06930 at 1533.456 kb on + strand, within AO356_06930 at 1533.456 kb on + strand, within AO356_06930 at 1533.456 kb on + strand, within AO356_06930 at 1533.457 kb on - strand, within AO356_06930 at 1533.457 kb on - strand, within AO356_06930 at 1533.465 kb on + strand, within AO356_06930 at 1533.465 kb on + strand, within AO356_06930 at 1533.465 kb on + strand, within AO356_06930 at 1533.466 kb on - strand, within AO356_06930 at 1533.466 kb on - strand, within AO356_06930 at 1533.544 kb on - strand, within AO356_06930 at 1533.705 kb on + strand at 1533.705 kb on + strand at 1533.721 kb on - strand at 1533.808 kb on + strand at 1533.822 kb on + strand at 1533.822 kb on + strand at 1533.822 kb on + strand at 1533.822 kb on + strand at 1533.823 kb on - strand at 1533.823 kb on - strand at 1533.823 kb on - strand at 1533.842 kb on + strand at 1533.842 kb on + strand at 1533.842 kb on + strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.843 kb on - strand at 1533.849 kb on + strand at 1533.849 kb on + strand at 1533.850 kb on - strand at 1534.097 kb on - strand, within AO356_06935 at 1534.452 kb on + strand, within AO356_06935
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,532,136 - AO356_06915 0.82 +1.7 1,532,163 + AO356_06915 0.85 +0.8 1,532,163 + AO356_06915 0.85 -0.7 1,532,163 + AO356_06915 0.85 +0.1 1,532,163 + AO356_06915 0.85 +0.1 1,532,164 - AO356_06915 0.85 -0.3 1,532,164 - AO356_06915 0.85 +0.1 1,532,164 - AO356_06915 0.85 -0.2 1,532,164 - AO356_06915 0.85 +0.3 1,532,400 - AO356_06920 0.27 +1.5 1,532,420 + AO356_06920 0.32 +0.1 1,532,420 + AO356_06920 0.32 -1.1 1,532,420 + AO356_06920 0.32 +0.6 1,532,420 + AO356_06920 0.32 -0.1 1,532,420 + AO356_06920 0.32 -2.8 1,532,420 + AO356_06920 0.32 +0.5 1,532,420 + AO356_06920 0.32 -0.1 1,532,420 + AO356_06920 0.32 +0.4 1,532,421 - AO356_06920 0.32 +0.7 1,532,421 - AO356_06920 0.32 -0.0 1,532,421 - AO356_06920 0.32 -0.5 1,532,421 - AO356_06920 0.32 -1.4 1,532,421 - AO356_06920 0.32 -0.5 1,532,421 - AO356_06920 0.32 +0.5 1,532,421 - AO356_06920 0.32 +0.6 1,532,421 - AO356_06920 0.32 -0.4 1,532,421 - AO356_06920 0.32 -0.1 1,532,477 + AO356_06920 0.47 +0.7 1,532,477 + AO356_06920 0.47 -0.1 1,532,478 - AO356_06920 0.47 +0.1 1,532,478 - AO356_06920 0.47 +0.4 1,532,478 - AO356_06920 0.47 +0.4 1,532,478 - AO356_06920 0.47 +1.0 1,532,479 + AO356_06920 0.47 -0.5 1,532,479 + AO356_06920 0.47 -0.6 1,532,479 + AO356_06920 0.47 +0.5 1,532,480 - AO356_06920 0.47 -0.5 1,533,243 + AO356_06930 0.26 +0.1 1,533,243 + AO356_06930 0.26 -2.5 1,533,244 - AO356_06930 0.26 +0.2 1,533,244 - AO356_06930 0.26 -0.3 1,533,277 + AO356_06930 0.31 +0.9 1,533,277 + AO356_06930 0.31 +0.5 1,533,456 + AO356_06930 0.60 +1.1 1,533,456 + AO356_06930 0.60 +0.5 1,533,456 + AO356_06930 0.60 +0.0 1,533,457 - AO356_06930 0.60 +0.9 1,533,457 - AO356_06930 0.60 -0.7 1,533,465 + AO356_06930 0.61 -0.0 1,533,465 + AO356_06930 0.61 +0.3 1,533,465 + AO356_06930 0.61 -0.6 1,533,466 - AO356_06930 0.61 +0.3 1,533,466 - AO356_06930 0.61 +0.8 1,533,544 - AO356_06930 0.74 +1.0 1,533,705 + -0.2 1,533,705 + -0.4 1,533,721 - -0.0 1,533,808 + -0.5 1,533,822 + -0.5 1,533,822 + -0.1 1,533,822 + +0.4 1,533,822 + -1.1 1,533,823 - -0.1 1,533,823 - -0.4 1,533,823 - +0.1 1,533,842 + +1.4 1,533,842 + -0.1 1,533,842 + +0.2 1,533,843 - +0.3 1,533,843 - -0.1 1,533,843 - -0.1 1,533,843 - +0.8 1,533,843 - -0.3 1,533,843 - +0.1 1,533,843 - +1.3 1,533,849 + -1.0 1,533,849 + +0.1 1,533,850 - -0.1 1,534,097 - AO356_06935 0.25 -1.6 1,534,452 + AO356_06935 0.62 -0.3
Or see this region's nucleotide sequence