Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05470 and AO356_05475 are separated by 133 nucleotides AO356_05475 and AO356_05480 are separated by 207 nucleotides AO356_05480 and AO356_05485 are separated by 234 nucleotides
AO356_05470: AO356_05470 - zinc chelation protein SecC, at 1,225,321 to 1,225,524
_05470
AO356_05475: AO356_05475 - isochorismatase, at 1,225,658 to 1,226,215
_05475
AO356_05480: AO356_05480 - acyl-homoserine lactone acylase subunit beta, at 1,226,423 to 1,228,873
_05480
AO356_05485: AO356_05485 - DNA ligase-associated DEXH box helicase, at 1,229,108 to 1,230,139
_05485
Position (kb)
1226
1227
1228
1229 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1225.554 kb on + strand at 1225.554 kb on + strand at 1225.554 kb on + strand at 1225.554 kb on + strand at 1225.555 kb on - strand at 1225.555 kb on - strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.652 kb on + strand at 1225.653 kb on - strand at 1225.653 kb on - strand at 1225.653 kb on - strand at 1225.653 kb on - strand at 1225.653 kb on - strand at 1225.653 kb on - strand at 1225.653 kb on - strand at 1225.656 kb on + strand at 1225.656 kb on + strand at 1225.701 kb on + strand at 1225.701 kb on + strand at 1225.701 kb on + strand at 1225.701 kb on + strand at 1225.702 kb on - strand at 1225.767 kb on + strand, within AO356_05475 at 1225.767 kb on + strand, within AO356_05475 at 1225.767 kb on + strand, within AO356_05475 at 1225.767 kb on + strand, within AO356_05475 at 1225.767 kb on + strand, within AO356_05475 at 1225.768 kb on - strand, within AO356_05475 at 1225.768 kb on - strand, within AO356_05475 at 1225.768 kb on - strand, within AO356_05475 at 1226.207 kb on + strand at 1226.207 kb on + strand at 1226.207 kb on + strand at 1226.208 kb on - strand at 1226.208 kb on - strand at 1226.208 kb on - strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.241 kb on + strand at 1226.242 kb on - strand at 1226.242 kb on - strand at 1226.242 kb on - strand at 1226.242 kb on - strand at 1226.242 kb on - strand at 1226.242 kb on - strand at 1226.242 kb on - strand at 1226.335 kb on + strand at 1226.335 kb on + strand at 1226.336 kb on - strand at 1226.336 kb on - strand at 1226.379 kb on + strand at 1226.379 kb on + strand at 1226.380 kb on - strand at 1226.380 kb on - strand at 1226.388 kb on + strand at 1226.389 kb on - strand at 1226.389 kb on - strand at 1226.440 kb on + strand at 1226.440 kb on + strand at 1226.441 kb on - strand at 1226.657 kb on + strand at 1226.657 kb on + strand at 1226.657 kb on + strand at 1226.658 kb on - strand at 1226.658 kb on - strand at 1226.658 kb on - strand at 1226.677 kb on + strand, within AO356_05480 at 1226.677 kb on + strand, within AO356_05480 at 1226.677 kb on + strand, within AO356_05480 at 1226.762 kb on + strand, within AO356_05480 at 1226.762 kb on + strand, within AO356_05480 at 1226.762 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.804 kb on + strand, within AO356_05480 at 1226.805 kb on - strand, within AO356_05480 at 1226.805 kb on - strand, within AO356_05480 at 1226.805 kb on - strand, within AO356_05480 at 1226.846 kb on + strand, within AO356_05480 at 1226.846 kb on + strand, within AO356_05480 at 1226.846 kb on + strand, within AO356_05480 at 1226.846 kb on + strand, within AO356_05480 at 1226.846 kb on + strand, within AO356_05480 at 1226.846 kb on + strand, within AO356_05480 at 1226.847 kb on - strand, within AO356_05480 at 1226.847 kb on - strand, within AO356_05480 at 1226.847 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.868 kb on - strand, within AO356_05480 at 1226.930 kb on + strand, within AO356_05480 at 1227.414 kb on + strand, within AO356_05480 at 1227.476 kb on + strand, within AO356_05480 at 1227.476 kb on + strand, within AO356_05480 at 1227.524 kb on + strand, within AO356_05480 at 1227.524 kb on + strand, within AO356_05480 at 1227.524 kb on + strand, within AO356_05480 at 1227.524 kb on + strand, within AO356_05480 at 1227.524 kb on + strand, within AO356_05480 at 1227.525 kb on - strand, within AO356_05480 at 1227.525 kb on - strand, within AO356_05480 at 1227.860 kb on + strand, within AO356_05480 at 1227.900 kb on - strand, within AO356_05480 at 1227.962 kb on + strand, within AO356_05480 at 1228.070 kb on + strand, within AO356_05480 at 1228.196 kb on + strand, within AO356_05480 at 1228.196 kb on + strand, within AO356_05480 at 1228.197 kb on - strand, within AO356_05480 at 1228.197 kb on - strand, within AO356_05480 at 1228.256 kb on + strand, within AO356_05480 at 1228.256 kb on + strand, within AO356_05480 at 1228.257 kb on - strand, within AO356_05480 at 1228.257 kb on - strand, within AO356_05480 at 1228.257 kb on - strand, within AO356_05480 at 1228.257 kb on - strand, within AO356_05480 at 1228.257 kb on - strand, within AO356_05480 at 1228.257 kb on - strand, within AO356_05480 at 1228.361 kb on + strand, within AO356_05480 at 1228.544 kb on + strand, within AO356_05480 at 1228.544 kb on + strand, within AO356_05480 at 1228.545 kb on - strand, within AO356_05480 at 1228.575 kb on + strand, within AO356_05480 at 1228.575 kb on + strand, within AO356_05480 at 1228.575 kb on + strand, within AO356_05480 at 1228.576 kb on - strand, within AO356_05480 at 1228.576 kb on - strand, within AO356_05480 at 1228.678 kb on + strand at 1228.678 kb on + strand at 1228.757 kb on + strand at 1228.758 kb on - strand at 1228.758 kb on - strand at 1228.758 kb on - strand at 1228.758 kb on - strand at 1228.793 kb on + strand at 1228.794 kb on - strand at 1228.871 kb on + strand at 1228.871 kb on + strand at 1228.871 kb on + strand at 1228.872 kb on - strand at 1228.872 kb on - strand at 1228.894 kb on + strand at 1228.894 kb on + strand at 1228.895 kb on - strand at 1228.895 kb on - strand at 1228.895 kb on - strand at 1228.895 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.898 kb on - strand at 1228.953 kb on + strand at 1228.953 kb on + strand at 1229.041 kb on + strand at 1229.042 kb on - strand at 1229.077 kb on + strand at 1229.078 kb on - strand at 1229.078 kb on - strand at 1229.142 kb on - strand at 1229.142 kb on - strand at 1229.142 kb on - strand at 1229.162 kb on + strand at 1229.162 kb on + strand at 1229.163 kb on - strand at 1229.163 kb on - strand at 1229.243 kb on + strand, within AO356_05485 at 1229.243 kb on + strand, within AO356_05485 at 1229.243 kb on + strand, within AO356_05485 at 1229.243 kb on + strand, within AO356_05485 at 1229.244 kb on - strand, within AO356_05485 at 1229.244 kb on - strand, within AO356_05485 at 1229.244 kb on - strand, within AO356_05485 at 1229.244 kb on - strand, within AO356_05485 at 1229.346 kb on + strand, within AO356_05485 at 1229.346 kb on + strand, within AO356_05485 at 1229.346 kb on + strand, within AO356_05485 at 1229.395 kb on - strand, within AO356_05485 at 1229.395 kb on - strand, within AO356_05485 at 1229.438 kb on + strand, within AO356_05485 at 1229.438 kb on + strand, within AO356_05485 at 1229.439 kb on - strand, within AO356_05485 at 1229.439 kb on - strand, within AO356_05485 at 1229.491 kb on + strand, within AO356_05485 at 1229.491 kb on + strand, within AO356_05485 at 1229.492 kb on - strand, within AO356_05485 at 1229.492 kb on - strand, within AO356_05485 at 1229.528 kb on + strand, within AO356_05485 at 1229.528 kb on + strand, within AO356_05485 at 1229.621 kb on + strand, within AO356_05485 at 1229.622 kb on - strand, within AO356_05485 at 1229.622 kb on - strand, within AO356_05485 at 1229.622 kb on - strand, within AO356_05485 at 1229.718 kb on - strand, within AO356_05485 at 1229.753 kb on + strand, within AO356_05485 at 1229.753 kb on + strand, within AO356_05485 at 1229.753 kb on + strand, within AO356_05485 at 1229.753 kb on + strand, within AO356_05485 at 1229.753 kb on + strand, within AO356_05485 at 1229.754 kb on - strand, within AO356_05485 at 1229.754 kb on - strand, within AO356_05485 at 1229.754 kb on - strand, within AO356_05485 at 1229.754 kb on - strand, within AO356_05485 at 1229.754 kb on - strand, within AO356_05485 at 1229.754 kb on - strand, within AO356_05485 at 1229.855 kb on + strand, within AO356_05485
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,225,554 + -0.3 1,225,554 + +0.9 1,225,554 + -1.4 1,225,554 + +0.6 1,225,555 - -0.1 1,225,555 - +1.0 1,225,652 + +0.9 1,225,652 + -0.8 1,225,652 + +1.1 1,225,652 + -0.8 1,225,652 + -0.0 1,225,652 + -0.2 1,225,652 + -0.3 1,225,652 + -0.5 1,225,652 + -0.5 1,225,652 + +1.3 1,225,652 + -1.3 1,225,652 + -0.4 1,225,653 - -0.9 1,225,653 - +0.4 1,225,653 - +0.2 1,225,653 - -0.4 1,225,653 - +0.6 1,225,653 - -0.1 1,225,653 - +0.6 1,225,656 + +0.8 1,225,656 + +0.2 1,225,701 + +0.0 1,225,701 + -0.6 1,225,701 + +0.8 1,225,701 + +0.4 1,225,702 - +0.5 1,225,767 + AO356_05475 0.20 -2.3 1,225,767 + AO356_05475 0.20 -0.9 1,225,767 + AO356_05475 0.20 -2.0 1,225,767 + AO356_05475 0.20 -0.2 1,225,767 + AO356_05475 0.20 -0.4 1,225,768 - AO356_05475 0.20 +0.3 1,225,768 - AO356_05475 0.20 -0.1 1,225,768 - AO356_05475 0.20 -0.8 1,226,207 + -1.0 1,226,207 + -0.3 1,226,207 + -1.3 1,226,208 - +0.3 1,226,208 - +0.1 1,226,208 - -1.0 1,226,241 + -0.6 1,226,241 + +0.8 1,226,241 + -2.0 1,226,241 + +0.5 1,226,241 + +0.6 1,226,241 + -0.4 1,226,241 + +0.8 1,226,241 + -0.9 1,226,242 - -1.4 1,226,242 - -0.4 1,226,242 - +1.9 1,226,242 - +1.0 1,226,242 - -1.3 1,226,242 - +0.5 1,226,242 - -0.1 1,226,335 + -1.3 1,226,335 + +0.2 1,226,336 - +0.1 1,226,336 - +0.8 1,226,379 + -0.5 1,226,379 + +0.6 1,226,380 - +0.3 1,226,380 - +0.7 1,226,388 + -0.0 1,226,389 - +0.1 1,226,389 - -0.0 1,226,440 + -1.1 1,226,440 + -0.0 1,226,441 - +0.2 1,226,657 + -0.3 1,226,657 + -0.2 1,226,657 + -1.3 1,226,658 - -0.2 1,226,658 - -1.0 1,226,658 - +0.9 1,226,677 + AO356_05480 0.10 -0.6 1,226,677 + AO356_05480 0.10 -0.2 1,226,677 + AO356_05480 0.10 -0.7 1,226,762 + AO356_05480 0.14 +1.8 1,226,762 + AO356_05480 0.14 +1.3 1,226,762 + AO356_05480 0.14 -2.9 1,226,804 + AO356_05480 0.16 -0.3 1,226,804 + AO356_05480 0.16 +0.1 1,226,804 + AO356_05480 0.16 -0.6 1,226,804 + AO356_05480 0.16 -0.0 1,226,804 + AO356_05480 0.16 +0.3 1,226,804 + AO356_05480 0.16 -0.4 1,226,804 + AO356_05480 0.16 +0.6 1,226,804 + AO356_05480 0.16 +0.4 1,226,805 - AO356_05480 0.16 -0.8 1,226,805 - AO356_05480 0.16 -0.0 1,226,805 - AO356_05480 0.16 -0.3 1,226,846 + AO356_05480 0.17 -1.1 1,226,846 + AO356_05480 0.17 +0.5 1,226,846 + AO356_05480 0.17 +0.7 1,226,846 + AO356_05480 0.17 -0.0 1,226,846 + AO356_05480 0.17 +0.4 1,226,846 + AO356_05480 0.17 +0.0 1,226,847 - AO356_05480 0.17 +0.4 1,226,847 - AO356_05480 0.17 -0.3 1,226,847 - AO356_05480 0.17 -2.0 1,226,868 - AO356_05480 0.18 +0.1 1,226,868 - AO356_05480 0.18 -1.1 1,226,868 - AO356_05480 0.18 -1.6 1,226,868 - AO356_05480 0.18 -0.0 1,226,868 - AO356_05480 0.18 -0.2 1,226,868 - AO356_05480 0.18 -0.1 1,226,868 - AO356_05480 0.18 -0.9 1,226,930 + AO356_05480 0.21 -1.0 1,227,414 + AO356_05480 0.40 +0.8 1,227,476 + AO356_05480 0.43 +0.3 1,227,476 + AO356_05480 0.43 +0.2 1,227,524 + AO356_05480 0.45 +0.1 1,227,524 + AO356_05480 0.45 -1.1 1,227,524 + AO356_05480 0.45 +0.5 1,227,524 + AO356_05480 0.45 -0.2 1,227,524 + AO356_05480 0.45 +0.8 1,227,525 - AO356_05480 0.45 +0.3 1,227,525 - AO356_05480 0.45 +1.6 1,227,860 + AO356_05480 0.59 +0.3 1,227,900 - AO356_05480 0.60 +0.7 1,227,962 + AO356_05480 0.63 -0.2 1,228,070 + AO356_05480 0.67 +0.3 1,228,196 + AO356_05480 0.72 -0.5 1,228,196 + AO356_05480 0.72 -0.4 1,228,197 - AO356_05480 0.72 +1.0 1,228,197 - AO356_05480 0.72 -0.3 1,228,256 + AO356_05480 0.75 -1.3 1,228,256 + AO356_05480 0.75 -0.4 1,228,257 - AO356_05480 0.75 -0.5 1,228,257 - AO356_05480 0.75 -1.1 1,228,257 - AO356_05480 0.75 -0.4 1,228,257 - AO356_05480 0.75 +0.0 1,228,257 - AO356_05480 0.75 -0.4 1,228,257 - AO356_05480 0.75 -0.8 1,228,361 + AO356_05480 0.79 -0.2 1,228,544 + AO356_05480 0.87 +0.4 1,228,544 + AO356_05480 0.87 -1.3 1,228,545 - AO356_05480 0.87 +1.0 1,228,575 + AO356_05480 0.88 +0.6 1,228,575 + AO356_05480 0.88 +0.8 1,228,575 + AO356_05480 0.88 -0.4 1,228,576 - AO356_05480 0.88 +0.6 1,228,576 - AO356_05480 0.88 -0.6 1,228,678 + -0.1 1,228,678 + +1.2 1,228,757 + -0.3 1,228,758 - -0.9 1,228,758 - +0.4 1,228,758 - -0.3 1,228,758 - -0.2 1,228,793 + +0.3 1,228,794 - +1.0 1,228,871 + -1.9 1,228,871 + -0.0 1,228,871 + -1.3 1,228,872 - -0.4 1,228,872 - -0.7 1,228,894 + +1.3 1,228,894 + -0.7 1,228,895 - +0.2 1,228,895 - +0.6 1,228,895 - +0.7 1,228,895 - -0.3 1,228,898 - -0.6 1,228,898 - -0.9 1,228,898 - -0.4 1,228,898 - +1.0 1,228,898 - -0.6 1,228,898 - +1.0 1,228,898 - -0.7 1,228,898 - -0.4 1,228,898 - +0.3 1,228,898 - -0.3 1,228,953 + -0.8 1,228,953 + +0.3 1,229,041 + -0.8 1,229,042 - +0.4 1,229,077 + -0.2 1,229,078 - +0.1 1,229,078 - -0.1 1,229,142 - -0.1 1,229,142 - +0.9 1,229,142 - +0.0 1,229,162 + +0.4 1,229,162 + +0.7 1,229,163 - +0.4 1,229,163 - +0.4 1,229,243 + AO356_05485 0.13 -0.4 1,229,243 + AO356_05485 0.13 -0.3 1,229,243 + AO356_05485 0.13 -0.1 1,229,243 + AO356_05485 0.13 -0.4 1,229,244 - AO356_05485 0.13 +0.3 1,229,244 - AO356_05485 0.13 -1.1 1,229,244 - AO356_05485 0.13 +0.8 1,229,244 - AO356_05485 0.13 -0.0 1,229,346 + AO356_05485 0.23 -0.0 1,229,346 + AO356_05485 0.23 -0.3 1,229,346 + AO356_05485 0.23 +0.1 1,229,395 - AO356_05485 0.28 +0.0 1,229,395 - AO356_05485 0.28 -0.0 1,229,438 + AO356_05485 0.32 -0.4 1,229,438 + AO356_05485 0.32 +0.0 1,229,439 - AO356_05485 0.32 -1.1 1,229,439 - AO356_05485 0.32 +0.4 1,229,491 + AO356_05485 0.37 -0.4 1,229,491 + AO356_05485 0.37 +0.3 1,229,492 - AO356_05485 0.37 +0.5 1,229,492 - AO356_05485 0.37 +0.6 1,229,528 + AO356_05485 0.41 +1.0 1,229,528 + AO356_05485 0.41 -0.4 1,229,621 + AO356_05485 0.50 +0.5 1,229,622 - AO356_05485 0.50 +0.1 1,229,622 - AO356_05485 0.50 +0.4 1,229,622 - AO356_05485 0.50 +1.1 1,229,718 - AO356_05485 0.59 -1.3 1,229,753 + AO356_05485 0.62 +0.9 1,229,753 + AO356_05485 0.62 -0.2 1,229,753 + AO356_05485 0.62 +0.6 1,229,753 + AO356_05485 0.62 +0.2 1,229,753 + AO356_05485 0.62 -2.8 1,229,754 - AO356_05485 0.63 -0.0 1,229,754 - AO356_05485 0.63 +0.0 1,229,754 - AO356_05485 0.63 +0.5 1,229,754 - AO356_05485 0.63 +0.2 1,229,754 - AO356_05485 0.63 +0.5 1,229,754 - AO356_05485 0.63 +0.5 1,229,855 + AO356_05485 0.72 -0.5
Or see this region's nucleotide sequence