Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04575 and AO356_04580 are separated by 559 nucleotides AO356_04580 and AO356_04585 overlap by 32 nucleotides AO356_04585 and AO356_04590 overlap by 17 nucleotides AO356_04590 and AO356_04595 are separated by 149 nucleotides
AO356_04575: AO356_04575 - RNA polymerase subunit sigma, at 1,031,081 to 1,031,662
_04575
AO356_04580: AO356_04580 - L-aspartate oxidase, at 1,032,222 to 1,033,838
_04580
AO356_04585: AO356_04585 - hypothetical protein, at 1,033,807 to 1,034,259
_04585
AO356_04590: AO356_04590 - hypothetical protein, at 1,034,243 to 1,034,497
_04590
AO356_04595: AO356_04595 - aminomethyltransferase, at 1,034,647 to 1,035,588
_04595
Position (kb)
1032
1033
1034 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1031.222 kb on + strand, within AO356_04575 at 1031.222 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.343 kb on + strand, within AO356_04575 at 1031.344 kb on - strand, within AO356_04575 at 1031.344 kb on - strand, within AO356_04575 at 1031.344 kb on - strand, within AO356_04575 at 1031.344 kb on - strand, within AO356_04575 at 1031.344 kb on - strand, within AO356_04575 at 1031.344 kb on - strand, within AO356_04575 at 1031.366 kb on + strand, within AO356_04575 at 1031.366 kb on + strand, within AO356_04575 at 1031.366 kb on + strand, within AO356_04575 at 1031.366 kb on + strand, within AO356_04575 at 1031.367 kb on - strand, within AO356_04575 at 1031.367 kb on - strand, within AO356_04575 at 1031.367 kb on - strand, within AO356_04575 at 1031.367 kb on - strand, within AO356_04575 at 1031.406 kb on + strand, within AO356_04575 at 1031.446 kb on + strand, within AO356_04575 at 1031.447 kb on - strand, within AO356_04575 at 1031.448 kb on + strand, within AO356_04575 at 1031.448 kb on + strand, within AO356_04575 at 1031.449 kb on - strand, within AO356_04575 at 1031.473 kb on + strand, within AO356_04575 at 1031.577 kb on + strand, within AO356_04575 at 1031.577 kb on + strand, within AO356_04575 at 1031.577 kb on + strand, within AO356_04575 at 1031.577 kb on + strand, within AO356_04575 at 1031.577 kb on + strand, within AO356_04575 at 1031.578 kb on - strand, within AO356_04575 at 1031.578 kb on - strand, within AO356_04575 at 1031.657 kb on + strand at 1031.698 kb on + strand at 1031.698 kb on + strand at 1031.699 kb on - strand at 1031.701 kb on + strand at 1031.701 kb on + strand at 1031.701 kb on + strand at 1031.702 kb on - strand at 1031.702 kb on - strand at 1031.702 kb on - strand at 1031.702 kb on - strand at 1031.724 kb on - strand at 1031.831 kb on + strand at 1031.832 kb on - strand at 1031.832 kb on - strand at 1031.872 kb on + strand at 1031.872 kb on + strand at 1031.872 kb on + strand at 1031.872 kb on + strand at 1031.916 kb on - strand at 1031.916 kb on - strand at 1031.916 kb on - strand at 1031.925 kb on - strand at 1031.949 kb on - strand at 1031.952 kb on + strand at 1031.952 kb on + strand at 1031.952 kb on + strand at 1031.953 kb on - strand at 1031.953 kb on - strand at 1031.953 kb on - strand at 1031.953 kb on - strand at 1032.109 kb on + strand at 1032.130 kb on + strand at 1032.130 kb on + strand at 1032.130 kb on + strand at 1032.130 kb on + strand at 1032.130 kb on + strand at 1032.130 kb on + strand at 1032.130 kb on + strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.131 kb on - strand at 1032.132 kb on + strand at 1032.132 kb on + strand at 1032.132 kb on + strand at 1032.132 kb on + strand at 1032.132 kb on + strand at 1032.132 kb on + strand at 1032.132 kb on + strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.133 kb on - strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.134 kb on + strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.135 kb on - strand at 1032.137 kb on + strand at 1032.137 kb on + strand at 1032.137 kb on + strand at 1032.137 kb on + strand at 1032.138 kb on - strand at 1032.138 kb on - strand at 1032.253 kb on + strand at 1032.768 kb on + strand, within AO356_04580 at 1032.769 kb on - strand, within AO356_04580 at 1032.769 kb on - strand, within AO356_04580 at 1032.804 kb on + strand, within AO356_04580 at 1032.804 kb on + strand, within AO356_04580 at 1032.805 kb on - strand, within AO356_04580 at 1032.805 kb on - strand, within AO356_04580 at 1032.805 kb on - strand, within AO356_04580 at 1032.805 kb on - strand, within AO356_04580 at 1032.805 kb on - strand, within AO356_04580 at 1032.805 kb on - strand, within AO356_04580 at 1032.852 kb on + strand, within AO356_04580 at 1032.852 kb on + strand, within AO356_04580 at 1032.852 kb on + strand, within AO356_04580 at 1032.852 kb on + strand, within AO356_04580 at 1032.853 kb on - strand, within AO356_04580 at 1032.853 kb on - strand, within AO356_04580 at 1032.853 kb on - strand, within AO356_04580 at 1032.853 kb on - strand, within AO356_04580 at 1032.858 kb on + strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.859 kb on - strand, within AO356_04580 at 1032.860 kb on + strand, within AO356_04580 at 1032.860 kb on + strand, within AO356_04580 at 1032.861 kb on - strand, within AO356_04580 at 1032.861 kb on - strand, within AO356_04580 at 1032.861 kb on - strand, within AO356_04580 at 1032.966 kb on + strand, within AO356_04580 at 1032.966 kb on + strand, within AO356_04580 at 1032.967 kb on - strand, within AO356_04580 at 1033.149 kb on + strand, within AO356_04580 at 1033.150 kb on - strand, within AO356_04580 at 1033.206 kb on + strand, within AO356_04580 at 1033.206 kb on + strand, within AO356_04580 at 1033.206 kb on + strand, within AO356_04580 at 1033.207 kb on - strand, within AO356_04580 at 1033.275 kb on + strand, within AO356_04580 at 1033.275 kb on + strand, within AO356_04580 at 1033.275 kb on + strand, within AO356_04580 at 1033.276 kb on - strand, within AO356_04580 at 1033.276 kb on - strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.277 kb on + strand, within AO356_04580 at 1033.278 kb on - strand, within AO356_04580 at 1033.278 kb on - strand, within AO356_04580 at 1033.278 kb on - strand, within AO356_04580 at 1033.278 kb on - strand, within AO356_04580 at 1033.332 kb on + strand, within AO356_04580 at 1033.332 kb on + strand, within AO356_04580 at 1033.332 kb on + strand, within AO356_04580 at 1033.333 kb on - strand, within AO356_04580 at 1033.333 kb on - strand, within AO356_04580 at 1033.333 kb on - strand, within AO356_04580 at 1033.333 kb on - strand, within AO356_04580 at 1033.333 kb on - strand, within AO356_04580 at 1033.569 kb on + strand, within AO356_04580 at 1033.569 kb on + strand, within AO356_04580 at 1033.569 kb on + strand, within AO356_04580 at 1033.570 kb on - strand, within AO356_04580 at 1033.570 kb on - strand, within AO356_04580 at 1033.653 kb on + strand, within AO356_04580 at 1033.654 kb on - strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.765 kb on - strand at 1033.765 kb on - strand at 1033.765 kb on - strand at 1033.808 kb on + strand at 1033.808 kb on + strand at 1033.809 kb on - strand at 1033.809 kb on - strand at 1033.809 kb on - strand at 1033.827 kb on + strand at 1033.827 kb on + strand at 1033.827 kb on + strand at 1033.828 kb on - strand at 1033.828 kb on - strand at 1033.968 kb on + strand, within AO356_04585 at 1034.244 kb on + strand at 1034.244 kb on + strand at 1034.244 kb on + strand at 1034.244 kb on + strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.514 kb on - strand at 1034.514 kb on - strand at 1034.525 kb on - strand at 1034.525 kb on - strand at 1034.526 kb on + strand at 1034.526 kb on + strand at 1034.526 kb on + strand at 1034.527 kb on - strand at 1034.527 kb on - strand at 1034.527 kb on - strand at 1034.527 kb on - strand at 1034.587 kb on + strand at 1034.610 kb on + strand at 1034.611 kb on - strand at 1034.611 kb on - strand at 1034.611 kb on - strand at 1034.619 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 1,031,222 + AO356_04575 0.24 -3.7 1,031,222 + AO356_04575 0.24 -3.1 1,031,343 + AO356_04575 0.45 -1.0 1,031,343 + AO356_04575 0.45 -3.3 1,031,343 + AO356_04575 0.45 -3.0 1,031,343 + AO356_04575 0.45 -3.4 1,031,343 + AO356_04575 0.45 -0.1 1,031,343 + AO356_04575 0.45 -3.2 1,031,343 + AO356_04575 0.45 +0.8 1,031,343 + AO356_04575 0.45 -3.3 1,031,343 + AO356_04575 0.45 -1.7 1,031,344 - AO356_04575 0.45 -2.9 1,031,344 - AO356_04575 0.45 -2.8 1,031,344 - AO356_04575 0.45 -1.8 1,031,344 - AO356_04575 0.45 -4.4 1,031,344 - AO356_04575 0.45 -2.7 1,031,344 - AO356_04575 0.45 -1.7 1,031,366 + AO356_04575 0.49 -2.0 1,031,366 + AO356_04575 0.49 -1.4 1,031,366 + AO356_04575 0.49 -0.9 1,031,366 + AO356_04575 0.49 -3.2 1,031,367 - AO356_04575 0.49 -1.0 1,031,367 - AO356_04575 0.49 -2.3 1,031,367 - AO356_04575 0.49 -3.0 1,031,367 - AO356_04575 0.49 -3.5 1,031,406 + AO356_04575 0.56 -2.0 1,031,446 + AO356_04575 0.63 -2.5 1,031,447 - AO356_04575 0.63 -3.5 1,031,448 + AO356_04575 0.63 -0.9 1,031,448 + AO356_04575 0.63 -2.9 1,031,449 - AO356_04575 0.63 -3.3 1,031,473 + AO356_04575 0.67 -3.3 1,031,577 + AO356_04575 0.85 -2.3 1,031,577 + AO356_04575 0.85 -3.0 1,031,577 + AO356_04575 0.85 -2.7 1,031,577 + AO356_04575 0.85 -3.6 1,031,577 + AO356_04575 0.85 -2.7 1,031,578 - AO356_04575 0.85 -1.6 1,031,578 - AO356_04575 0.85 -3.0 1,031,657 + -2.6 1,031,698 + -2.7 1,031,698 + -0.4 1,031,699 - -1.1 1,031,701 + -1.2 1,031,701 + -3.5 1,031,701 + -3.2 1,031,702 - -2.9 1,031,702 - -1.3 1,031,702 - -2.8 1,031,702 - -3.5 1,031,724 - -2.8 1,031,831 + -2.7 1,031,832 - +0.3 1,031,832 - +0.3 1,031,872 + -2.3 1,031,872 + -2.1 1,031,872 + -3.5 1,031,872 + -0.7 1,031,916 - -0.3 1,031,916 - +0.3 1,031,916 - -0.2 1,031,925 - +1.2 1,031,949 - +1.0 1,031,952 + -1.8 1,031,952 + -1.6 1,031,952 + -3.0 1,031,953 - +0.5 1,031,953 - +0.3 1,031,953 - +1.1 1,031,953 - -0.0 1,032,109 + -1.4 1,032,130 + -0.8 1,032,130 + +1.2 1,032,130 + -3.0 1,032,130 + -1.7 1,032,130 + -2.2 1,032,130 + -2.9 1,032,130 + -1.2 1,032,131 - +0.1 1,032,131 - -0.4 1,032,131 - -0.7 1,032,131 - +1.0 1,032,131 - +0.2 1,032,131 - -0.3 1,032,131 - +0.8 1,032,131 - +0.2 1,032,131 - +0.9 1,032,131 - +0.5 1,032,131 - +1.1 1,032,132 + -3.6 1,032,132 + -2.9 1,032,132 + -1.4 1,032,132 + -2.3 1,032,132 + -1.3 1,032,132 + -2.3 1,032,132 + -3.0 1,032,133 - +1.9 1,032,133 - +2.0 1,032,133 - -0.6 1,032,133 - +0.2 1,032,133 - +0.4 1,032,133 - -0.3 1,032,133 - -0.7 1,032,133 - +1.0 1,032,133 - -0.7 1,032,133 - +0.8 1,032,133 - -0.5 1,032,133 - +0.2 1,032,134 + -1.5 1,032,134 + -2.8 1,032,134 + -1.3 1,032,134 + -1.8 1,032,134 + -1.4 1,032,134 + -1.6 1,032,134 + -2.7 1,032,134 + -1.1 1,032,134 + -1.3 1,032,134 + -3.1 1,032,135 - -0.4 1,032,135 - +0.2 1,032,135 - +0.2 1,032,135 - -0.0 1,032,135 - +1.5 1,032,135 - +0.6 1,032,135 - -0.8 1,032,135 - -0.3 1,032,135 - +1.3 1,032,135 - -0.3 1,032,135 - +0.4 1,032,135 - -0.4 1,032,135 - +0.7 1,032,135 - -0.3 1,032,135 - +0.1 1,032,135 - -0.1 1,032,137 + +0.0 1,032,137 + -2.3 1,032,137 + -2.1 1,032,137 + -1.6 1,032,138 - +0.6 1,032,138 - -0.0 1,032,253 + -2.1 1,032,768 + AO356_04580 0.34 +0.3 1,032,769 - AO356_04580 0.34 +0.2 1,032,769 - AO356_04580 0.34 +0.0 1,032,804 + AO356_04580 0.36 -1.5 1,032,804 + AO356_04580 0.36 +0.5 1,032,805 - AO356_04580 0.36 +1.0 1,032,805 - AO356_04580 0.36 +0.9 1,032,805 - AO356_04580 0.36 +0.5 1,032,805 - AO356_04580 0.36 -0.3 1,032,805 - AO356_04580 0.36 +0.5 1,032,805 - AO356_04580 0.36 +0.5 1,032,852 + AO356_04580 0.39 +0.4 1,032,852 + AO356_04580 0.39 -0.7 1,032,852 + AO356_04580 0.39 +0.3 1,032,852 + AO356_04580 0.39 +0.3 1,032,853 - AO356_04580 0.39 +0.2 1,032,853 - AO356_04580 0.39 -0.3 1,032,853 - AO356_04580 0.39 +0.1 1,032,853 - AO356_04580 0.39 +0.7 1,032,858 + AO356_04580 0.39 +0.6 1,032,859 - AO356_04580 0.39 +0.1 1,032,859 - AO356_04580 0.39 +0.5 1,032,859 - AO356_04580 0.39 -0.1 1,032,859 - AO356_04580 0.39 +1.0 1,032,859 - AO356_04580 0.39 +0.2 1,032,859 - AO356_04580 0.39 +0.4 1,032,859 - AO356_04580 0.39 +0.4 1,032,860 + AO356_04580 0.39 +0.8 1,032,860 + AO356_04580 0.39 -0.1 1,032,861 - AO356_04580 0.40 -0.2 1,032,861 - AO356_04580 0.40 +0.7 1,032,861 - AO356_04580 0.40 +0.5 1,032,966 + AO356_04580 0.46 +0.9 1,032,966 + AO356_04580 0.46 +0.1 1,032,967 - AO356_04580 0.46 +0.3 1,033,149 + AO356_04580 0.57 +0.5 1,033,150 - AO356_04580 0.57 +0.5 1,033,206 + AO356_04580 0.61 -0.3 1,033,206 + AO356_04580 0.61 +0.2 1,033,206 + AO356_04580 0.61 +0.3 1,033,207 - AO356_04580 0.61 +0.1 1,033,275 + AO356_04580 0.65 +0.3 1,033,275 + AO356_04580 0.65 +0.4 1,033,275 + AO356_04580 0.65 +0.1 1,033,276 - AO356_04580 0.65 +0.4 1,033,276 - AO356_04580 0.65 +1.0 1,033,277 + AO356_04580 0.65 +0.5 1,033,277 + AO356_04580 0.65 -0.2 1,033,277 + AO356_04580 0.65 +0.4 1,033,277 + AO356_04580 0.65 +0.1 1,033,277 + AO356_04580 0.65 -0.7 1,033,277 + AO356_04580 0.65 +0.2 1,033,277 + AO356_04580 0.65 +0.4 1,033,277 + AO356_04580 0.65 -0.4 1,033,278 - AO356_04580 0.65 -1.0 1,033,278 - AO356_04580 0.65 -0.0 1,033,278 - AO356_04580 0.65 +0.8 1,033,278 - AO356_04580 0.65 +0.2 1,033,332 + AO356_04580 0.69 -0.6 1,033,332 + AO356_04580 0.69 -0.9 1,033,332 + AO356_04580 0.69 -1.6 1,033,333 - AO356_04580 0.69 -0.1 1,033,333 - AO356_04580 0.69 +0.8 1,033,333 - AO356_04580 0.69 +0.3 1,033,333 - AO356_04580 0.69 -0.5 1,033,333 - AO356_04580 0.69 +0.2 1,033,569 + AO356_04580 0.83 +0.3 1,033,569 + AO356_04580 0.83 -0.5 1,033,569 + AO356_04580 0.83 +0.6 1,033,570 - AO356_04580 0.83 +1.5 1,033,570 - AO356_04580 0.83 -0.3 1,033,653 + AO356_04580 0.88 +1.1 1,033,654 - AO356_04580 0.89 +0.1 1,033,662 + AO356_04580 0.89 +1.4 1,033,662 + AO356_04580 0.89 +0.3 1,033,662 + AO356_04580 0.89 -0.4 1,033,662 + AO356_04580 0.89 +0.6 1,033,663 - AO356_04580 0.89 +0.5 1,033,663 - AO356_04580 0.89 +0.3 1,033,663 - AO356_04580 0.89 +0.0 1,033,663 - AO356_04580 0.89 +0.5 1,033,764 + +0.2 1,033,764 + +0.0 1,033,764 + -0.7 1,033,764 + +0.1 1,033,764 + +0.5 1,033,765 - +0.8 1,033,765 - -0.7 1,033,765 - -0.4 1,033,808 + -0.7 1,033,808 + -0.0 1,033,809 - -1.6 1,033,809 - -0.2 1,033,809 - +0.2 1,033,827 + -0.9 1,033,827 + -0.5 1,033,827 + -0.4 1,033,828 - +0.3 1,033,828 - -2.6 1,033,968 + AO356_04585 0.36 +0.9 1,034,244 + +0.0 1,034,244 + -0.3 1,034,244 + +0.3 1,034,244 + -1.3 1,034,245 - +0.5 1,034,245 - -0.7 1,034,245 - +0.9 1,034,245 - -0.0 1,034,245 - -0.9 1,034,514 - +0.4 1,034,514 - -0.7 1,034,525 - -1.5 1,034,525 - +0.2 1,034,526 + -0.4 1,034,526 + -1.6 1,034,526 + -0.5 1,034,527 - -0.1 1,034,527 - +0.9 1,034,527 - +0.1 1,034,527 - +0.4 1,034,587 + +0.4 1,034,610 + -0.2 1,034,611 - -0.0 1,034,611 - +0.7 1,034,611 - -0.9 1,034,619 + +0.5
Or see this region's nucleotide sequence