Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04265 and AO356_04270 overlap by 7 nucleotides AO356_04270 and AO356_04275 are separated by 192 nucleotides AO356_04275 and AO356_04280 are separated by 329 nucleotides
AO356_04265: AO356_04265 - anti-sigma factor, at 968,529 to 968,765
_04265
AO356_04270: AO356_04270 - RNA polymerase subunit sigma-24, at 968,759 to 969,370
_04270
AO356_04275: AO356_04275 - 3-oxoacyl-ACP synthase, at 969,563 to 970,684
_04275
AO356_04280: AO356_04280 - ATP-dependent RNA helicase HrpA, at 971,014 to 974,925
_04280
Position (kb) 969
970
971 Strain fitness (log2 ratio) -2
-1
0
1
2 at 968.863 kb on + strand, within AO356_04270 at 968.863 kb on + strand, within AO356_04270 at 968.909 kb on + strand, within AO356_04270 at 969.117 kb on + strand, within AO356_04270 at 969.118 kb on - strand, within AO356_04270 at 969.118 kb on - strand, within AO356_04270 at 969.261 kb on + strand, within AO356_04270 at 969.262 kb on - strand, within AO356_04270 at 969.310 kb on - strand at 969.521 kb on + strand at 969.521 kb on + strand at 969.522 kb on - strand at 969.654 kb on + strand at 969.654 kb on + strand at 969.654 kb on + strand at 969.655 kb on - strand at 969.655 kb on - strand at 969.700 kb on - strand, within AO356_04275 at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.596 kb on + strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.597 kb on - strand at 970.600 kb on + strand at 970.600 kb on + strand at 970.600 kb on + strand at 970.601 kb on - strand at 970.601 kb on - strand at 970.601 kb on - strand at 970.601 kb on - strand at 970.650 kb on + strand at 970.650 kb on + strand at 970.650 kb on + strand at 970.651 kb on - strand at 970.651 kb on - strand at 970.679 kb on - strand at 970.679 kb on - strand at 970.679 kb on - strand at 970.717 kb on + strand at 970.718 kb on - strand at 970.731 kb on + strand at 970.731 kb on + strand at 970.731 kb on + strand at 970.731 kb on + strand at 970.732 kb on - strand at 970.732 kb on - strand at 970.732 kb on - strand at 970.738 kb on - strand at 970.738 kb on - strand at 970.738 kb on - strand at 970.785 kb on + strand at 970.786 kb on - strand at 970.836 kb on + strand at 970.836 kb on + strand at 970.836 kb on + strand at 970.837 kb on - strand at 970.838 kb on + strand at 970.839 kb on - strand at 970.839 kb on - strand at 970.857 kb on - strand at 971.106 kb on - strand at 971.126 kb on + strand at 971.127 kb on - strand at 971.127 kb on - strand at 971.127 kb on - strand at 971.127 kb on - strand at 971.336 kb on + strand at 971.586 kb on + strand, within AO356_04280 at 971.587 kb on - strand, within AO356_04280 at 971.624 kb on + strand, within AO356_04280
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 968,863 + AO356_04270 0.17 -0.4 968,863 + AO356_04270 0.17 -1.0 968,909 + AO356_04270 0.25 +0.4 969,117 + AO356_04270 0.58 +0.4 969,118 - AO356_04270 0.59 -0.5 969,118 - AO356_04270 0.59 +0.1 969,261 + AO356_04270 0.82 -0.8 969,262 - AO356_04270 0.82 +0.2 969,310 - +0.4 969,521 + -0.2 969,521 + +0.5 969,522 - -0.8 969,654 + +1.5 969,654 + +1.0 969,654 + -0.7 969,655 - +0.7 969,655 - +0.2 969,700 - AO356_04275 0.12 +1.0 970,596 + -1.5 970,596 + +0.2 970,596 + -0.0 970,596 + -0.1 970,596 + -0.2 970,596 + +0.6 970,596 + +0.4 970,596 + +0.2 970,596 + +0.2 970,596 + +1.1 970,597 - -1.0 970,597 - +0.2 970,597 - -0.1 970,597 - +0.1 970,597 - -0.3 970,597 - +0.4 970,597 - -0.4 970,597 - +0.5 970,597 - -1.6 970,597 - +0.6 970,600 + +0.2 970,600 + +0.3 970,600 + -0.4 970,601 - +0.1 970,601 - -0.1 970,601 - -0.5 970,601 - -0.3 970,650 + +0.0 970,650 + -0.1 970,650 + +1.6 970,651 - +0.5 970,651 - +2.3 970,679 - +0.1 970,679 - -0.5 970,679 - -0.7 970,717 + +0.6 970,718 - -2.3 970,731 + +0.1 970,731 + -0.6 970,731 + +0.4 970,731 + +1.0 970,732 - +0.2 970,732 - -0.7 970,732 - +0.5 970,738 - -0.4 970,738 - +0.1 970,738 - +0.2 970,785 + +0.3 970,786 - +0.2 970,836 + -0.1 970,836 + -1.1 970,836 + +0.8 970,837 - -0.8 970,838 + +0.6 970,839 - -0.9 970,839 - +0.7 970,857 - -0.5 971,106 - -0.6 971,126 + -0.5 971,127 - -1.6 971,127 - -0.0 971,127 - +0.8 971,127 - +0.1 971,336 + -0.3 971,586 + AO356_04280 0.15 +1.0 971,587 - AO356_04280 0.15 -1.3 971,624 + AO356_04280 0.16 +0.4
Or see this region's nucleotide sequence