Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1375
Experiment: MoYLS4 with Neomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Neomycin 0.06 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,682,795 | - | DvMF_1374 | 0.29 | -0.4 | |
1,682,838 | + | DvMF_1374 | 0.33 | -0.3 | |
1,682,957 | + | DvMF_1374 | 0.42 | +0.4 | |
1,682,965 | - | DvMF_1374 | 0.43 | -0.1 | |
1,682,993 | - | DvMF_1374 | 0.45 | -0.4 | |
1,683,059 | + | DvMF_1374 | 0.51 | -0.7 | |
1,683,139 | + | DvMF_1374 | 0.57 | -0.2 | |
1,683,147 | - | DvMF_1374 | 0.58 | -0.1 | |
1,683,471 | + | DvMF_1374 | 0.84 | -0.4 | |
1,683,545 | + | -0.9 | |||
1,683,845 | - | DvMF_1375 | 0.16 | +0.2 | |
1,683,950 | - | DvMF_1375 | 0.24 | -0.0 | |
1,683,957 | + | DvMF_1375 | 0.24 | -0.7 | |
1,684,064 | - | DvMF_1375 | 0.32 | +0.5 | |
1,684,102 | - | DvMF_1375 | 0.35 | +0.5 | |
1,684,194 | - | DvMF_1375 | 0.42 | +0.1 | |
1,684,231 | + | DvMF_1375 | 0.44 | +1.1 | |
1,684,239 | - | DvMF_1375 | 0.45 | +0.1 | |
1,684,267 | - | DvMF_1375 | 0.47 | -0.0 | |
1,684,391 | + | DvMF_1375 | 0.56 | -0.1 | |
1,684,576 | - | DvMF_1375 | 0.70 | +0.7 | |
1,684,605 | - | DvMF_1375 | 0.72 | +0.7 | |
1,684,630 | - | DvMF_1375 | 0.74 | +0.2 | |
1,684,765 | - | DvMF_1375 | 0.84 | +0.5 | |
1,684,802 | + | DvMF_1375 | 0.87 | -0.1 | |
1,685,111 | + | +0.1 | |||
1,685,167 | - | -0.3 | |||
1,685,359 | - | +0.4 |
Or see this region's nucleotide sequence