Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1226
Experiment: MoYLS4 with Neomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Neomycin 0.06 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,510,843 | + | DvMF_1225 | 0.62 | -0.0 | |
1,511,085 | - | DvMF_1225 | 0.76 | -0.0 | |
1,511,248 | + | DvMF_1225 | 0.85 | -0.1 | |
1,511,574 | - | -0.9 | |||
1,511,771 | + | -0.2 | |||
1,511,873 | - | -0.5 | |||
1,511,968 | + | DvMF_1226 | 0.15 | -0.1 | |
1,511,983 | - | DvMF_1226 | 0.16 | -0.5 | |
1,512,516 | - | DvMF_1226 | 0.54 | +0.1 | |
1,512,594 | + | DvMF_1226 | 0.59 | -0.2 | |
1,512,826 | + | DvMF_1226 | 0.76 | +0.2 | |
1,512,861 | - | DvMF_1226 | 0.78 | +0.6 | |
1,512,870 | + | DvMF_1226 | 0.79 | -0.8 | |
1,513,166 | - | -0.3 | |||
1,513,242 | - | -0.4 | |||
1,513,252 | - | -0.3 | |||
1,513,323 | - | -0.6 | |||
1,513,449 | - | +0.4 | |||
1,513,983 | + | DvMF_1227 | 0.13 | -0.5 | |
1,514,032 | - | DvMF_1227 | 0.16 | -0.4 | |
1,514,041 | + | DvMF_1227 | 0.16 | -0.0 | |
1,514,041 | + | DvMF_1227 | 0.16 | -0.3 | |
1,514,061 | - | DvMF_1227 | 0.17 | +1.0 | |
1,514,091 | - | DvMF_1227 | 0.19 | -0.1 | |
1,514,091 | - | DvMF_1227 | 0.19 | -0.4 | |
1,514,091 | - | -0.3 |
Or see this region's nucleotide sequence