Experiment: MoYLS4 with Neomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0521 and DvMF_0522 are separated by 136 nucleotides DvMF_0522 and DvMF_0523 are separated by 144 nucleotides
DvMF_0521: DvMF_0521 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 614,613 to 615,491
_0521
DvMF_0522: DvMF_0522 - ABC transporter related (RefSeq), at 615,628 to 616,377
_0522
DvMF_0523: DvMF_0523 - magnesium transporter (RefSeq), at 616,522 to 617,925
_0523
Position (kb) 615
616
617 Strain fitness (log2 ratio) -1
0
1 at 614.673 kb on - strand at 614.704 kb on + strand, within DvMF_0521 at 614.720 kb on + strand, within DvMF_0521 at 614.811 kb on + strand, within DvMF_0521 at 614.966 kb on + strand, within DvMF_0521 at 615.085 kb on + strand, within DvMF_0521 at 615.293 kb on - strand, within DvMF_0521 at 615.336 kb on + strand, within DvMF_0521 at 615.355 kb on + strand, within DvMF_0521 at 615.614 kb on + strand at 615.962 kb on + strand, within DvMF_0522 at 615.972 kb on + strand, within DvMF_0522 at 615.990 kb on - strand, within DvMF_0522 at 616.037 kb on + strand, within DvMF_0522 at 616.206 kb on - strand, within DvMF_0522 at 616.224 kb on - strand, within DvMF_0522 at 616.229 kb on - strand, within DvMF_0522 at 616.250 kb on + strand, within DvMF_0522 at 616.358 kb on + strand at 616.415 kb on + strand at 616.417 kb on - strand at 616.527 kb on + strand at 616.763 kb on - strand, within DvMF_0523 at 617.156 kb on + strand, within DvMF_0523 at 617.324 kb on + strand, within DvMF_0523
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Neomycin 0.06 mg/ml remove 614,673 - +1.1 614,704 + DvMF_0521 0.10 +0.0 614,720 + DvMF_0521 0.12 +0.1 614,811 + DvMF_0521 0.23 +0.6 614,966 + DvMF_0521 0.40 -0.1 615,085 + DvMF_0521 0.54 -0.4 615,293 - DvMF_0521 0.77 +0.0 615,336 + DvMF_0521 0.82 -0.2 615,355 + DvMF_0521 0.84 -0.8 615,614 + -0.3 615,962 + DvMF_0522 0.45 -0.4 615,972 + DvMF_0522 0.46 -0.6 615,990 - DvMF_0522 0.48 -0.6 616,037 + DvMF_0522 0.55 -1.5 616,206 - DvMF_0522 0.77 +0.0 616,224 - DvMF_0522 0.79 -0.1 616,229 - DvMF_0522 0.80 -1.1 616,250 + DvMF_0522 0.83 +1.0 616,358 + -0.3 616,415 + -0.3 616,417 - -0.6 616,527 + -0.6 616,763 - DvMF_0523 0.17 +0.1 617,156 + DvMF_0523 0.45 -1.2 617,324 + DvMF_0523 0.57 -0.5
Or see this region's nucleotide sequence