Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3608

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
4,675,488	+		BT3607	0.47	-0.6
4,675,510	-		BT3607	0.49	+1.4
4,675,510	-		BT3607	0.49	+0.2
4,675,510	-		BT3607	0.49	+3.0
4,675,514	+		BT3607	0.49	-1.0
4,675,548	-		BT3607	0.52	-0.2
4,675,558	+		BT3607	0.53	-1.6
4,675,559	-		BT3607	0.53	-2.3
4,675,611	+		BT3607	0.58	+0.7
4,675,659	+		BT3607	0.62	-2.9
4,675,678	+		BT3607	0.64	-1.5
4,675,678	+		BT3607	0.64	+0.6
4,675,686	+		BT3607	0.65	+0.9
4,675,687	-		BT3607	0.65	-0.6
4,675,690	+		BT3607	0.65	+0.8
4,675,710	+		BT3607	0.67	-1.2
4,675,712	+		BT3607	0.67	+1.4
4,675,713	-		BT3607	0.67	+0.4
4,675,713	-				+1.4
4,675,726	+		BT3607	0.69	+0.3
4,675,734	-		BT3607	0.69	-2.2
4,675,779	+		BT3607	0.73	+0.4
4,675,780	-		BT3607	0.73	+0.1
4,675,782	+		BT3607	0.74	-0.8
4,675,861	-		BT3607	0.81	+0.4
4,675,870	+		BT3607	0.82	-1.4
4,675,924	+		BT3607	0.87	+0.1
4,675,925	-		BT3607	0.87	+0.4
4,675,994	-				-3.0
4,675,994	-				-2.2
4,676,101	-				+1.7
4,676,107	+				-1.1
4,676,148	+				-2.1
4,676,318	+				-0.0
4,676,318	+				-0.5
4,676,356	+				-1.4
4,676,366	+				+0.4
4,676,367	-				+0.1
4,676,510	-				-1.4
4,676,513	+				-1.4
4,676,514	-				-0.5
4,676,583	+		BT3608	0.11	-1.3
4,676,583	+		BT3608	0.11	-3.4
4,676,743	+		BT3608	0.24	-1.8
4,676,792	+		BT3608	0.28	-1.9
4,676,926	+		BT3608	0.40	-0.2
4,676,926	+		BT3608	0.40	-1.4
4,676,946	+		BT3608	0.41	+0.9
4,676,946	+		BT3608	0.41	-0.5
4,677,012	+		BT3608	0.47	-0.9
4,677,068	-		BT3608	0.52	-0.2
4,677,150	-		BT3608	0.59	-0.2
4,677,191	-		BT3608	0.62	-2.9
4,677,445	+		BT3608	0.84	+0.4
4,677,446	-		BT3608	0.84	+0.7
4,677,451	-		BT3608	0.84	-3.5
4,677,528	+				-0.8
4,677,546	-				+0.8
4,677,612	+				+0.2
4,677,722	+				-0.0
4,677,827	+				-1.1
4,677,828	-				-0.2
4,677,830	+				-1.6
4,677,882	-		BT3609	0.12	-3.1
4,677,885	-		BT3609	0.12	-1.1
4,677,922	-		BT3609	0.15	+2.4
4,677,926	+		BT3609	0.15	-0.4
4,677,927	-		BT3609	0.15	-2.1
4,677,927	-		BT3609	0.15	-1.9
4,677,927	-		BT3609	0.15	-0.6
4,677,928	+		BT3609	0.16	-2.4
4,677,929	-		BT3609	0.16	-0.6
4,677,935	-		BT3609	0.16	-3.1
4,677,944	+		BT3609	0.17	+0.8
4,677,944	+		BT3609	0.17	-1.6
4,677,944	+		BT3609	0.17	+0.1
4,677,945	-		BT3609	0.17	-1.5
4,678,034	-		BT3609	0.25	-0.4
4,678,069	+		BT3609	0.28	-1.5
4,678,080	+		BT3609	0.29	+1.4
4,678,082	+		BT3609	0.29	+1.6
4,678,083	-		BT3609	0.29	-2.3
4,678,083	-		BT3609	0.29	-2.4
4,678,195	+		BT3609	0.39	-0.6
4,678,306	-		BT3609	0.49	+0.5
4,678,306	-		BT3609	0.49	-1.6
4,678,306	-		BT3609	0.49	+1.4
4,678,311	-		BT3609	0.49	-0.1
4,678,314	+		BT3609	0.49	-3.0
4,678,338	+		BT3609	0.51	-2.1
4,678,372	-		BT3609	0.54	-1.2
4,678,405	-		BT3609	0.57	-0.2
4,678,410	+		BT3609	0.58	-2.6
4,678,410	+		BT3609	0.58	-0.9
4,678,524	+		BT3609	0.68	+1.4
4,678,525	-		BT3609	0.68	+0.4
4,678,598	-		BT3609	0.74	+0.2
4,678,622	+		BT3609	0.76	-1.9
4,678,631	+		BT3609	0.77	+0.4
4,678,632	-		BT3609	0.77	-3.2