Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3197

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
4,086,386	-		BT3196	0.20	+1.4
4,086,434	-		BT3196	0.26	+0.1
4,086,449	+		BT3196	0.29	-1.6
4,086,468	-		BT3196	0.31	+0.5
4,086,533	-		BT3196	0.40	+1.4
4,086,580	-		BT3196	0.47	-0.6
4,086,585	-		BT3196	0.48	-0.6
4,086,585	-		BT3196	0.48	+0.7
4,086,587	-		BT3196	0.48	-0.9
4,086,641	-		BT3196	0.56	+0.6
4,086,641	-		BT3196	0.56	-1.4
4,086,641	-		BT3196	0.56	-1.4
4,086,730	-		BT3196	0.68	+0.4
4,087,252	-				-0.3
4,087,252	-				-2.4
4,087,252	-				+1.1
4,087,256	-				-0.1
4,087,274	-				+1.3
4,087,276	-				-1.4
4,087,285	-				-1.7
4,087,296	-				+3.2
4,087,307	-				-3.6
4,087,455	-		BT3197	0.23	-3.6
4,087,650	-		BT3197	0.84	-2.9
4,087,683	-				+0.1
4,087,683	-				-0.5
4,087,738	+				-2.5
4,087,766	-				-2.3
4,087,839	-		BT3198	0.17	-0.1
4,087,841	+		BT3198	0.17	+0.2
4,087,841	+		BT3198	0.17	+1.5
4,087,842	-		BT3198	0.17	+0.3
4,087,843	+		BT3198	0.17	-3.5
4,087,894	+		BT3198	0.23	-0.5
4,087,895	-		BT3198	0.23	+1.5
4,087,919	-		BT3198	0.25	+0.3
4,087,919	-		BT3198	0.25	+0.3
4,088,009	+		BT3198	0.35	-0.4
4,088,090	+		BT3198	0.44	-0.1
4,088,091	-		BT3198	0.44	-0.4
4,088,188	+		BT3198	0.55	+0.0
4,088,275	-		BT3198	0.65	+2.8
4,088,290	-		BT3198	0.66	-1.0
4,088,372	-		BT3198	0.75	-0.4
4,088,469	-		BT3198	0.86	-0.8
4,088,528	-				-2.4
4,088,528	-				-0.3
4,088,648	-				+0.1
4,088,665	-				-0.8