Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1562

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
1,927,863	-				-1.0
1,927,870	-		BT1561	0.10	-1.3
1,928,095	-		BT1561	0.68	-1.6
1,928,394	+				-3.1
1,928,395	-				+0.3
1,928,397	-		BT1562	0.10	+0.8
1,928,399	+		BT1562	0.11	+1.4
1,928,400	-		BT1562	0.11	+2.3
1,928,400	-		BT1562	0.11	-1.0
1,928,400	-		BT1562	0.11	+0.7
1,928,406	-		BT1562	0.12	-0.7
1,928,408	+		BT1562	0.12	+1.3
1,928,651	-		BT1562	0.64	+0.6
1,928,651	-		BT1562	0.64	-1.8
1,928,692	-		BT1562	0.72	+0.4
1,928,692	-		BT1562	0.72	+0.5
1,928,699	-		BT1562	0.74	-2.2
1,928,702	+		BT1562	0.74	+0.8
1,928,749	+		BT1562	0.84	-1.8
1,928,820	+				-1.7
1,928,821	-				-2.3
1,928,876	+				-0.8
1,928,876	+				-1.4
1,928,982	-		BT1563	0.21	-1.8
1,928,996	+		BT1563	0.23	-2.0
1,928,997	-		BT1563	0.23	-1.0
1,929,029	+		BT1563	0.28	+0.8
1,929,141	-		BT1563	0.45	-1.9
1,929,145	-		BT1563	0.46	-0.4
1,929,295	+		BT1563	0.69	+1.1
1,929,325	-		BT1563	0.74	-0.1
1,929,325	-		BT1563	0.74	-2.6
1,929,325	-		BT1563	0.74	+1.5
1,929,327	-		BT1563	0.74	-1.6
1,929,327	-		BT1563	0.74	-1.3
1,929,350	+		BT1563	0.78	+0.7
1,929,400	+		BT1563	0.86	-1.2
1,929,456	-				-2.4
1,929,456	-				+2.1
1,929,476	-				-3.2
1,929,476	-				-2.4
1,929,477	+				-2.5
1,929,477	+				-0.7
1,929,478	-				-0.9
1,929,480	+				-2.0
1,929,480	+				-1.4
1,929,490	-				+1.6
1,929,500	+				+1.1
1,929,500	+				+0.4
1,929,503	+				-0.7
1,929,512	+				-0.4
1,929,735	+		BT1564	0.47	-0.2
1,929,766	+		BT1564	0.54	-0.4