Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1452

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
1,787,307	+				-2.3
1,787,308	-				-0.9
1,787,318	+				-1.7
1,787,398	-				-0.1
1,787,430	-				-1.3
1,787,501	+				+0.5
1,787,515	+				-1.0
1,787,565	-				-1.1
1,787,641	-		BT1451	0.15	+0.5
1,787,755	-		BT1451	0.34	+3.8
1,787,804	-		BT1451	0.43	-1.4
1,787,965	-		BT1451	0.70	-1.4
1,787,975	+		BT1451	0.72	-1.1
1,788,038	+		BT1451	0.82	+0.2
1,788,038	+		BT1451	0.82	-2.5
1,788,126	+				-0.7
1,788,180	-				+0.3
1,788,191	+				-0.4
1,788,192	-				+0.5
1,788,193	+				+1.5
1,788,211	+				-1.1
1,788,212	-				+0.0
1,788,265	+				+0.2
1,788,384	-		BT1452	0.15	+1.9
1,788,489	+		BT1452	0.22	-3.1
1,788,634	+		BT1452	0.32	+2.9
1,788,634	+		BT1452	0.32	-3.3
1,788,853	+		BT1452	0.47	-1.0
1,788,853	+		BT1452	0.47	+1.8
1,789,167	+		BT1452	0.69	-1.4
1,789,291	+		BT1452	0.77	+0.9
1,789,298	+		BT1452	0.78	+0.8
1,789,299	-		BT1452	0.78	-0.4
1,789,299	-		BT1452	0.78	+0.7
1,789,303	-		BT1452	0.78	+1.2
1,789,328	-		BT1452	0.80	+1.5
1,789,348	+		BT1452	0.81	-0.3
1,789,352	+		BT1452	0.82	+1.2
1,789,352	+		BT1452	0.82	-0.5
1,789,352	+		BT1452	0.82	+0.7
1,789,353	-		BT1452	0.82	-0.4
1,789,353	-		BT1452	0.82	-0.7
1,789,353	-		BT1452	0.82	-2.1
1,789,357	-		BT1452	0.82	-0.3
1,789,372	+		BT1452	0.83	-2.5
1,789,434	+		BT1452	0.87	+0.5
1,789,489	-				+1.2
1,789,490	+				+0.6
1,789,509	-				-1.8
1,789,520	+				-0.1
1,789,521	-				-2.4
1,789,549	+				-2.3
1,789,602	-				-0.4
1,789,643	+				+0.9
1,789,696	-				+0.2
1,789,740	-				-2.9
1,789,788	-				+0.4
1,789,820	+				+0.8
1,789,878	-				+1.2
1,789,904	-				+1.5
1,789,904	-				+0.9
1,789,947	-				-2.8
1,789,961	-				+0.2
1,789,961	-				-2.4
1,790,023	+		BT1453	0.11	-0.9
1,790,024	-		BT1453	0.11	-2.3
1,790,026	-		BT1453	0.11	-1.2
1,790,026	-		BT1453	0.11	-2.1
1,790,056	+		BT1453	0.13	-2.0
1,790,056	+		BT1453	0.13	+2.2
1,790,057	-		BT1453	0.13	+0.1
1,790,120	+		BT1453	0.17	-1.6
1,790,159	+		BT1453	0.20	-2.3
1,790,235	-		BT1453	0.25	-0.1
1,790,275	+				+1.2
1,790,390	+		BT1453	0.35	+1.0
1,790,549	+		BT1453	0.46	-1.7
1,790,550	-		BT1453	0.46	+2.5
1,790,591	+		BT1453	0.49	-0.8
1,790,592	-		BT1453	0.49	-0.3