Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1052

Experiment: BHIS with Fusidic 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.002 mg/ml
1,334,301	-		BT1051	0.62	-1.5
1,334,301	-		BT1051	0.62	+1.2
1,334,323	+		BT1051	0.63	-1.2
1,334,324	-		BT1051	0.63	+0.7
1,334,463	+		BT1051	0.69	-0.7
1,334,468	-		BT1051	0.69	-1.3
1,334,504	+		BT1051	0.71	-2.5
1,334,540	+		BT1051	0.72	-1.2
1,334,566	+		BT1051	0.73	-3.3
1,334,592	+		BT1051	0.74	+0.4
1,334,608	-		BT1051	0.75	-2.2
1,334,610	-		BT1051	0.75	-1.5
1,334,907	-		BT1051	0.88	-1.7
1,334,914	+		BT1051	0.88	+0.2
1,334,914	+		BT1051	0.88	-0.9
1,334,925	-		BT1051	0.89	-2.9
1,334,989	-				-3.8
1,335,034	-				-1.5
1,335,085	+				-0.1
1,335,112	+				+1.1
1,335,115	-				+0.4
1,335,119	+				-3.0
1,335,164	+				+0.6
1,335,165	-				-1.5
1,335,217	-				+0.6
1,335,321	+				+0.2
1,335,505	+		BT1052	0.26	-2.3
1,335,537	-		BT1052	0.29	-0.9
1,335,539	+		BT1052	0.30	+0.3
1,335,803	-		BT1052	0.56	-2.9
1,335,807	-		BT1052	0.56	-2.5
1,336,001	+		BT1052	0.76	-3.4
1,336,095	-		BT1052	0.85	-1.5
1,336,117	+		BT1052	0.88	-0.7
1,336,117	+		BT1052	0.88	+1.1
1,336,120	+		BT1052	0.88	+2.1
1,336,134	+		BT1052	0.89	-1.6
1,336,134	+		BT1052	0.89	-1.1
1,336,213	+				+0.1
1,336,311	-				+0.7
1,336,371	+				-2.1
1,336,418	+				-2.8
1,336,420	+				-2.0
1,336,428	+				-1.5
1,336,571	+		BT1053	0.28	+0.6
1,336,614	+		BT1053	0.35	-1.1
1,336,971	+				+1.5