Experiment: BHIS with Fusidic 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0192 and BT0193 are separated by 6 nucleotides BT0193 and BT0194 are separated by 1 nucleotides BT0194 and BT0195 are separated by 20 nucleotides BT0195 and BT0196 are separated by 12 nucleotides
BT0192: BT0192 - cell surface protein (NCBI ptt file), at 205,007 to 206,974
BT0192
BT0193: BT0193 - conserved hypothetical protein (NCBI ptt file), at 206,981 to 207,862
BT0193
BT0194: BT0194 - hypothetical protein (NCBI ptt file), at 207,864 to 208,922
BT0194
BT0195: BT0195 - glycerophosphoryl diester phosphodiesterase (NCBI ptt file), at 208,943 to 209,842
BT0195
BT0196: BT0196 - putative hexose phosphate transport protein (NCBI ptt file), at 209,855 to 211,201
BT0196
Position (kb) 207
208
209 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 206.875 kb on + strand at 206.947 kb on + strand at 207.430 kb on + strand, within BT0193 at 207.430 kb on + strand, within BT0193 at 207.527 kb on - strand, within BT0193 at 207.619 kb on - strand, within BT0193 at 207.640 kb on - strand, within BT0193 at 207.741 kb on - strand, within BT0193 at 207.846 kb on - strand at 207.848 kb on - strand at 207.861 kb on - strand at 207.863 kb on + strand at 207.950 kb on + strand at 208.091 kb on + strand, within BT0194 at 208.145 kb on + strand, within BT0194 at 208.264 kb on - strand, within BT0194 at 208.275 kb on + strand, within BT0194 at 208.283 kb on + strand, within BT0194 at 208.284 kb on - strand, within BT0194 at 208.284 kb on - strand, within BT0194 at 208.313 kb on + strand, within BT0194 at 208.314 kb on - strand, within BT0194 at 208.348 kb on - strand, within BT0194 at 208.501 kb on + strand, within BT0194 at 208.502 kb on - strand, within BT0194 at 208.506 kb on - strand, within BT0194 at 208.569 kb on - strand, within BT0194 at 208.613 kb on + strand, within BT0194 at 208.651 kb on - strand, within BT0194 at 208.674 kb on - strand, within BT0194 at 208.869 kb on + strand at 208.870 kb on - strand at 209.131 kb on + strand, within BT0195 at 209.279 kb on - strand, within BT0195 at 209.356 kb on - strand, within BT0195 at 209.356 kb on - strand, within BT0195 at 209.400 kb on - strand, within BT0195 at 209.491 kb on - strand, within BT0195 at 209.589 kb on - strand, within BT0195 at 209.589 kb on - strand, within BT0195 at 209.598 kb on + strand, within BT0195 at 209.644 kb on - strand, within BT0195 at 209.803 kb on - strand at 209.870 kb on - strand at 209.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Fusidic 0.002 mg/ml remove 206,875 + +0.4 206,947 + +0.5 207,430 + BT0193 0.51 -1.3 207,430 + BT0193 0.51 -1.2 207,527 - BT0193 0.62 +1.1 207,619 - BT0193 0.72 +0.8 207,640 - BT0193 0.75 +1.5 207,741 - BT0193 0.86 -1.7 207,846 - -1.5 207,848 - -0.9 207,861 - -1.2 207,863 + -1.5 207,950 + -1.6 208,091 + BT0194 0.21 -0.9 208,145 + BT0194 0.27 -2.6 208,264 - BT0194 0.38 +0.5 208,275 + BT0194 0.39 -2.5 208,283 + BT0194 0.40 -3.0 208,284 - BT0194 0.40 -2.2 208,284 - BT0194 0.40 -2.0 208,313 + BT0194 0.42 +0.3 208,314 - BT0194 0.42 -0.9 208,348 - BT0194 0.46 -0.3 208,501 + BT0194 0.60 -0.7 208,502 - BT0194 0.60 -1.5 208,506 - BT0194 0.61 +1.1 208,569 - BT0194 0.67 -1.0 208,613 + BT0194 0.71 -1.1 208,651 - BT0194 0.74 -1.7 208,674 - BT0194 0.76 +1.1 208,869 + -0.5 208,870 - -0.6 209,131 + BT0195 0.21 -2.1 209,279 - BT0195 0.37 +0.1 209,356 - BT0195 0.46 +1.1 209,356 - BT0195 0.46 -2.2 209,400 - BT0195 0.51 -1.5 209,491 - BT0195 0.61 +0.3 209,589 - BT0195 0.72 +0.1 209,589 - BT0195 0.72 -1.9 209,598 + BT0195 0.73 +1.1 209,644 - BT0195 0.78 -1.8 209,803 - +0.1 209,870 - -0.3 209,918 - -0.9
Or see this region's nucleotide sequence