Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0279 and wbaZ-2 are separated by 312 nucleotides wbaZ-2 and DVU0281 are separated by 104 nucleotides
DVU0279: DVU0279 - sulfate permease family protein (TIGR), at 322,378 to 324,084
DVU0279
DVU0280: wbaZ-2 - glycosyl transferase, group 1 family protein (TIGR), at 324,397 to 325,536
wbaZ-2
DVU0281: DVU0281 - exopolysaccharide biosynthesis protein, putative (TIGR), at 325,641 to 327,074
DVU0281
Position (kb) 324
325
326 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 323.469 kb on - strand, within DVU0279 at 323.485 kb on - strand, within DVU0279 at 323.544 kb on - strand, within DVU0279 at 323.623 kb on - strand, within DVU0279 at 323.655 kb on + strand, within DVU0279 at 323.663 kb on - strand, within DVU0279 at 323.663 kb on - strand, within DVU0279 at 323.705 kb on - strand, within DVU0279 at 323.710 kb on + strand, within DVU0279 at 323.721 kb on + strand, within DVU0279 at 323.736 kb on + strand, within DVU0279 at 323.736 kb on - strand, within DVU0279 at 323.852 kb on - strand, within DVU0279 at 323.852 kb on - strand, within DVU0279 at 323.884 kb on - strand, within DVU0279 at 323.884 kb on - strand, within DVU0279 at 323.906 kb on - strand, within DVU0279 at 323.925 kb on + strand at 323.945 kb on - strand at 324.032 kb on + strand at 324.057 kb on + strand at 324.065 kb on - strand at 324.074 kb on + strand at 324.077 kb on - strand at 324.079 kb on + strand at 324.082 kb on - strand at 324.169 kb on - strand at 324.183 kb on + strand at 324.183 kb on + strand at 324.183 kb on + strand at 324.191 kb on - strand at 324.191 kb on - strand at 324.325 kb on - strand at 324.561 kb on + strand, within wbaZ-2 at 324.640 kb on + strand, within wbaZ-2 at 324.712 kb on + strand, within wbaZ-2 at 324.712 kb on + strand, within wbaZ-2 at 324.824 kb on - strand, within wbaZ-2 at 324.868 kb on + strand, within wbaZ-2 at 324.982 kb on + strand, within wbaZ-2 at 325.131 kb on - strand, within wbaZ-2 at 325.189 kb on + strand, within wbaZ-2 at 325.196 kb on + strand, within wbaZ-2 at 325.221 kb on - strand, within wbaZ-2 at 325.221 kb on - strand, within wbaZ-2 at 325.223 kb on + strand, within wbaZ-2 at 325.235 kb on + strand, within wbaZ-2 at 325.310 kb on - strand, within wbaZ-2 at 325.310 kb on - strand, within wbaZ-2 at 325.567 kb on + strand at 325.896 kb on + strand, within DVU0281 at 326.087 kb on + strand, within DVU0281 at 326.104 kb on - strand, within DVU0281 at 326.242 kb on - strand, within DVU0281 at 326.284 kb on - strand, within DVU0281
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 323,469 - DVU0279 0.64 +0.0 323,485 - DVU0279 0.65 -1.4 323,544 - DVU0279 0.68 -0.9 323,623 - DVU0279 0.73 -3.1 323,655 + DVU0279 0.75 -1.6 323,663 - DVU0279 0.75 -0.2 323,663 - DVU0279 0.75 -0.8 323,705 - DVU0279 0.78 -0.3 323,710 + DVU0279 0.78 -0.4 323,721 + DVU0279 0.79 +0.0 323,736 + DVU0279 0.80 +0.0 323,736 - DVU0279 0.80 -0.2 323,852 - DVU0279 0.86 -0.4 323,852 - DVU0279 0.86 -0.1 323,884 - DVU0279 0.88 +0.7 323,884 - DVU0279 0.88 +0.6 323,906 - DVU0279 0.90 +0.1 323,925 + +0.5 323,945 - -0.1 324,032 + -0.2 324,057 + +0.3 324,065 - -0.4 324,074 + -1.2 324,077 - -0.5 324,079 + +0.3 324,082 - -2.9 324,169 - +0.1 324,183 + -0.3 324,183 + +0.2 324,183 + +0.0 324,191 - +0.8 324,191 - -0.2 324,325 - -0.1 324,561 + wbaZ-2 DVU0280 0.14 -1.9 324,640 + wbaZ-2 DVU0280 0.21 -0.2 324,712 + wbaZ-2 DVU0280 0.28 -0.8 324,712 + wbaZ-2 DVU0280 0.28 -0.0 324,824 - wbaZ-2 DVU0280 0.37 +0.1 324,868 + wbaZ-2 DVU0280 0.41 +0.8 324,982 + wbaZ-2 DVU0280 0.51 -0.5 325,131 - wbaZ-2 DVU0280 0.64 -0.6 325,189 + wbaZ-2 DVU0280 0.69 +0.2 325,196 + wbaZ-2 DVU0280 0.70 +0.3 325,221 - wbaZ-2 DVU0280 0.72 +1.1 325,221 - wbaZ-2 DVU0280 0.72 -0.3 325,223 + wbaZ-2 DVU0280 0.72 -0.4 325,235 + wbaZ-2 DVU0280 0.74 -1.6 325,310 - wbaZ-2 DVU0280 0.80 -1.4 325,310 - wbaZ-2 DVU0280 0.80 +0.2 325,567 + +0.1 325,896 + DVU0281 0.18 -0.9 326,087 + DVU0281 0.31 +0.3 326,104 - DVU0281 0.32 +0.2 326,242 - DVU0281 0.42 +0.1 326,284 - DVU0281 0.45 -0.4
Or see this region's nucleotide sequence