Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0249 and DVU0250 are separated by 307 nucleotides DVU0250 and DVU0251 are separated by 76 nucleotides
DVU0249: DVU0249 - conserved hypothetical protein (TIGR), at 283,424 to 284,395
DVU0249
DVU0250: DVU0250 - hypothetical protein (TIGR), at 284,703 to 285,290
DVU0250
DVU0251: DVU0251 - membrane protein, putative (TIGR), at 285,367 to 286,329
DVU0251
Position (kb) 284
285
286 Strain fitness (log2 ratio) -2
-1
0
1 at 283.819 kb on + strand, within DVU0249 at 283.827 kb on - strand, within DVU0249 at 283.838 kb on + strand, within DVU0249 at 283.925 kb on + strand, within DVU0249 at 283.970 kb on + strand, within DVU0249 at 283.970 kb on + strand, within DVU0249 at 283.990 kb on + strand, within DVU0249 at 284.085 kb on + strand, within DVU0249 at 284.122 kb on - strand, within DVU0249 at 284.125 kb on + strand, within DVU0249 at 284.133 kb on - strand, within DVU0249 at 284.145 kb on + strand, within DVU0249 at 284.146 kb on - strand, within DVU0249 at 284.272 kb on + strand, within DVU0249 at 284.295 kb on + strand, within DVU0249 at 284.298 kb on - strand at 284.317 kb on + strand at 284.320 kb on - strand at 284.324 kb on + strand at 284.325 kb on - strand at 284.395 kb on + strand at 284.403 kb on - strand at 284.405 kb on + strand at 284.499 kb on + strand at 284.596 kb on - strand at 284.625 kb on + strand at 284.629 kb on + strand at 284.636 kb on + strand at 284.671 kb on - strand at 284.708 kb on - strand at 284.718 kb on + strand at 284.757 kb on - strand at 284.874 kb on - strand, within DVU0250 at 284.874 kb on - strand, within DVU0250 at 284.907 kb on + strand, within DVU0250 at 284.907 kb on + strand, within DVU0250 at 284.950 kb on + strand, within DVU0250 at 284.958 kb on - strand, within DVU0250 at 285.109 kb on + strand, within DVU0250 at 285.135 kb on + strand, within DVU0250 at 285.210 kb on - strand, within DVU0250 at 285.252 kb on + strand at 285.349 kb on - strand at 285.359 kb on + strand at 285.402 kb on + strand at 285.428 kb on - strand at 285.454 kb on - strand at 285.464 kb on + strand, within DVU0251 at 285.471 kb on + strand, within DVU0251 at 285.527 kb on - strand, within DVU0251 at 285.527 kb on - strand, within DVU0251 at 285.534 kb on + strand, within DVU0251 at 285.542 kb on - strand, within DVU0251 at 285.591 kb on - strand, within DVU0251 at 285.606 kb on + strand, within DVU0251 at 285.660 kb on - strand, within DVU0251 at 285.697 kb on - strand, within DVU0251 at 285.772 kb on + strand, within DVU0251 at 285.793 kb on + strand, within DVU0251 at 285.800 kb on + strand, within DVU0251 at 285.800 kb on + strand, within DVU0251 at 285.978 kb on - strand, within DVU0251 at 286.000 kb on - strand, within DVU0251 at 286.022 kb on - strand, within DVU0251 at 286.049 kb on + strand, within DVU0251 at 286.056 kb on + strand, within DVU0251 at 286.111 kb on + strand, within DVU0251 at 286.148 kb on - strand, within DVU0251 at 286.218 kb on + strand, within DVU0251 at 286.236 kb on + strand at 286.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 283,819 + DVU0249 0.41 -1.3 283,827 - DVU0249 0.41 -0.2 283,838 + DVU0249 0.43 +0.7 283,925 + DVU0249 0.52 +0.3 283,970 + DVU0249 0.56 -0.9 283,970 + DVU0249 0.56 +0.2 283,990 + DVU0249 0.58 -0.0 284,085 + DVU0249 0.68 -1.3 284,122 - DVU0249 0.72 -0.0 284,125 + DVU0249 0.72 +0.3 284,133 - DVU0249 0.73 -1.3 284,145 + DVU0249 0.74 -0.4 284,146 - DVU0249 0.74 -0.2 284,272 + DVU0249 0.87 +0.4 284,295 + DVU0249 0.90 -0.1 284,298 - +0.3 284,317 + -1.9 284,320 - +0.3 284,324 + +0.0 284,325 - +0.7 284,395 + -1.2 284,403 - -0.2 284,405 + -0.1 284,499 + +0.0 284,596 - -0.7 284,625 + -0.3 284,629 + +0.6 284,636 + -0.6 284,671 - +0.1 284,708 - -0.5 284,718 + -0.7 284,757 - -0.1 284,874 - DVU0250 0.29 +0.3 284,874 - DVU0250 0.29 -1.2 284,907 + DVU0250 0.35 -2.2 284,907 + DVU0250 0.35 -0.4 284,950 + DVU0250 0.42 -0.4 284,958 - DVU0250 0.43 -0.8 285,109 + DVU0250 0.69 +0.6 285,135 + DVU0250 0.73 -2.0 285,210 - DVU0250 0.86 -0.0 285,252 + -0.0 285,349 - +0.1 285,359 + +0.2 285,402 + -0.2 285,428 - +0.0 285,454 - +0.2 285,464 + DVU0251 0.10 -1.2 285,471 + DVU0251 0.11 -0.8 285,527 - DVU0251 0.17 -0.4 285,527 - DVU0251 0.17 -1.7 285,534 + DVU0251 0.17 -0.3 285,542 - DVU0251 0.18 +0.4 285,591 - DVU0251 0.23 -1.3 285,606 + DVU0251 0.25 +0.1 285,660 - DVU0251 0.30 +0.7 285,697 - DVU0251 0.34 +0.6 285,772 + DVU0251 0.42 -0.0 285,793 + DVU0251 0.44 -0.2 285,800 + DVU0251 0.45 +0.2 285,800 + DVU0251 0.45 -0.6 285,978 - DVU0251 0.63 -0.3 286,000 - DVU0251 0.66 -1.4 286,022 - DVU0251 0.68 -0.3 286,049 + DVU0251 0.71 +0.6 286,056 + DVU0251 0.72 -0.2 286,111 + DVU0251 0.77 -0.4 286,148 - DVU0251 0.81 -1.1 286,218 + DVU0251 0.88 +0.3 286,236 + +0.5 286,290 - -0.4
Or see this region's nucleotide sequence