Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0198 and DVU0199 are separated by 9 nucleotides DVU0199 and DVU0200 are separated by 11 nucleotides DVU0200 and DVU0201 are separated by 8 nucleotides DVU0201 and DVU0202 are separated by 2 nucleotides DVU0202 and DVU0203 are separated by 20 nucleotides
DVU0198: DVU0198 - minor capsid protein C, degenerate (TIGR), at 244,274 to 245,593
DVU0198
DVU0199: DVU0199 - conserved hypothetical protein (TIGR), at 245,603 to 245,986
DVU0199
DVU0200: DVU0200 - major head protein (TIGR), at 245,998 to 247,002
DVU0200
DVU0201: DVU0201 - hypothetical protein (TIGR), at 247,011 to 247,331
DVU0201
DVU0202: DVU0202 - holin (TIGR), at 247,334 to 247,822
DVU0202
DVU0203: DVU0203 - conserved hypothetical protein (TIGR), at 247,843 to 248,391
DVU0203
Position (kb) 245
246
247
248 Strain fitness (log2 ratio) -1
0
1 at 245.056 kb on + strand, within DVU0198 at 245.056 kb on + strand, within DVU0198 at 245.086 kb on - strand, within DVU0198 at 246.527 kb on - strand, within DVU0200 at 247.045 kb on - strand, within DVU0201 at 247.045 kb on - strand, within DVU0201 at 247.057 kb on + strand, within DVU0201 at 247.057 kb on + strand, within DVU0201 at 247.057 kb on + strand, within DVU0201 at 247.059 kb on + strand, within DVU0201 at 247.084 kb on - strand, within DVU0201 at 247.249 kb on - strand, within DVU0201 at 247.362 kb on - strand at 247.499 kb on + strand, within DVU0202 at 247.499 kb on + strand, within DVU0202 at 247.499 kb on + strand, within DVU0202 at 247.499 kb on + strand, within DVU0202 at 247.925 kb on + strand, within DVU0203 at 247.925 kb on + strand, within DVU0203 at 247.925 kb on + strand, within DVU0203 at 247.967 kb on - strand, within DVU0203 at 247.967 kb on - strand, within DVU0203
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 245,056 + DVU0198 0.59 +0.6 245,056 + DVU0198 0.59 +0.2 245,086 - DVU0198 0.62 +0.5 246,527 - DVU0200 0.53 +0.3 247,045 - DVU0201 0.11 -1.3 247,045 - DVU0201 0.11 +0.1 247,057 + DVU0201 0.14 +0.4 247,057 + DVU0201 0.14 +0.3 247,057 + DVU0201 0.14 -0.2 247,059 + DVU0201 0.15 -0.8 247,084 - DVU0201 0.23 +0.5 247,249 - DVU0201 0.74 +0.8 247,362 - +0.2 247,499 + DVU0202 0.34 +0.2 247,499 + DVU0202 0.34 +0.6 247,499 + DVU0202 0.34 +0.2 247,499 + DVU0202 0.34 +0.5 247,925 + DVU0203 0.15 -0.0 247,925 + DVU0203 0.15 +0.6 247,925 + DVU0203 0.15 -1.4 247,967 - DVU0203 0.23 -0.2 247,967 - DVU0203 0.23 -0.6
Or see this region's nucleotide sequence