Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0189 and DVU0190 overlap by 4 nucleotides DVU0190 and DVU0191 are separated by 57 nucleotides DVU0191 and DVU0192 are separated by 126 nucleotides
DVU0189: DVU0189 - phage/plasmid primase, P4 family (TIGR), at 233,752 to 235,437
DVU0189
DVU0190: DVU0190 - hypothetical protein (TIGR), at 235,434 to 235,646
DVU0190
DVU0191: DVU0191 - conserved hypothetical protein (TIGR), at 235,704 to 237,263
DVU0191
DVU0192: DVU0192 - adenine specific DNA methyltransferase, putative (TIGR), at 237,390 to 238,748
DVU0192
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -1
0
1
2 at 235.369 kb on + strand at 235.453 kb on + strand at 235.748 kb on + strand at 235.788 kb on + strand at 235.796 kb on - strand at 236.030 kb on + strand, within DVU0191 at 236.066 kb on + strand, within DVU0191 at 236.087 kb on + strand, within DVU0191 at 236.087 kb on + strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.146 kb on + strand, within DVU0191 at 236.179 kb on + strand, within DVU0191 at 236.187 kb on - strand, within DVU0191 at 236.968 kb on + strand, within DVU0191 at 236.976 kb on - strand, within DVU0191 at 236.976 kb on - strand, within DVU0191 at 236.994 kb on + strand, within DVU0191 at 237.160 kb on - strand at 237.165 kb on - strand at 237.208 kb on + strand at 237.271 kb on + strand at 237.271 kb on + strand at 237.271 kb on + strand at 237.308 kb on - strand at 237.427 kb on + strand at 237.476 kb on - strand at 237.543 kb on + strand, within DVU0192 at 237.563 kb on + strand, within DVU0192 at 237.771 kb on + strand, within DVU0192 at 237.778 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.844 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.869 kb on - strand, within DVU0192 at 237.984 kb on + strand, within DVU0192 at 238.075 kb on + strand, within DVU0192 at 238.186 kb on + strand, within DVU0192 at 238.192 kb on + strand, within DVU0192 at 238.209 kb on - strand, within DVU0192
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 235,369 + +0.5 235,453 + +0.4 235,748 + -0.2 235,788 + -0.6 235,796 - +1.0 236,030 + DVU0191 0.21 +0.1 236,066 + DVU0191 0.23 -0.1 236,087 + DVU0191 0.25 +0.3 236,087 + DVU0191 0.25 +0.4 236,095 - DVU0191 0.25 -0.1 236,095 - DVU0191 0.25 -0.4 236,095 - DVU0191 0.25 +0.3 236,095 - DVU0191 0.25 +0.3 236,146 + DVU0191 0.28 -0.3 236,179 + DVU0191 0.30 -0.1 236,187 - DVU0191 0.31 -0.1 236,968 + DVU0191 0.81 +0.8 236,976 - DVU0191 0.82 -1.2 236,976 - DVU0191 0.82 -0.0 236,994 + DVU0191 0.83 +0.5 237,160 - -0.3 237,165 - -0.9 237,208 + -0.6 237,271 + +0.9 237,271 + -0.5 237,271 + +0.9 237,308 - +0.4 237,427 + -0.0 237,476 - +0.6 237,543 + DVU0192 0.11 -1.3 237,563 + DVU0192 0.13 +0.5 237,771 + DVU0192 0.28 +0.1 237,778 - DVU0192 0.29 +0.2 237,798 - DVU0192 0.30 -0.2 237,798 - DVU0192 0.30 +0.5 237,844 - DVU0192 0.33 +0.9 237,854 - DVU0192 0.34 -0.4 237,854 - DVU0192 0.34 -0.1 237,869 - DVU0192 0.35 +0.0 237,984 + DVU0192 0.44 +2.2 238,075 + DVU0192 0.50 +0.0 238,186 + DVU0192 0.59 -0.3 238,192 + DVU0192 0.59 +0.2 238,209 - DVU0192 0.60 -1.7
Or see this region's nucleotide sequence