Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt asnS and DVU0008 are separated by 157 nucleotides DVU0008 and dctM are separated by 460 nucleotides
DVU0007: asnS - asparaginyl-tRNA synthetase (TIGR), at 9,552 to 10,937
asnS
DVU0008: DVU0008 - hypothetical protein (TIGR), at 11,095 to 11,220
DVU0008
DVU0009: dctM - DedA family protein (TIGR), at 11,681 to 12,961
dctM
Position (kb)
11
12 Strain fitness (log2 ratio)
-2
-1
0
1 at 10.115 kb on + strand, within asnS at 10.130 kb on + strand, within asnS at 10.138 kb on - strand, within asnS at 10.269 kb on + strand, within asnS at 10.269 kb on + strand, within asnS at 10.269 kb on + strand, within asnS at 10.269 kb on + strand, within asnS at 10.269 kb on + strand, within asnS at 10.270 kb on + strand, within asnS at 10.270 kb on + strand, within asnS at 10.277 kb on - strand, within asnS at 10.277 kb on - strand, within asnS at 10.277 kb on - strand, within asnS at 10.278 kb on - strand, within asnS at 10.278 kb on - strand, within asnS at 10.278 kb on - strand, within asnS at 10.278 kb on - strand, within asnS at 10.306 kb on + strand, within asnS at 10.314 kb on - strand, within asnS at 10.314 kb on - strand, within asnS at 10.316 kb on + strand, within asnS at 10.325 kb on + strand, within asnS at 10.382 kb on + strand, within asnS at 10.390 kb on - strand, within asnS at 10.422 kb on + strand, within asnS at 10.443 kb on + strand, within asnS at 10.443 kb on - strand, within asnS at 10.574 kb on + strand, within asnS at 10.576 kb on + strand, within asnS at 10.582 kb on - strand, within asnS at 10.608 kb on - strand, within asnS at 10.629 kb on - strand, within asnS at 10.629 kb on - strand, within asnS at 10.660 kb on - strand, within asnS at 10.714 kb on + strand, within asnS at 10.714 kb on + strand, within asnS at 10.738 kb on + strand, within asnS at 10.747 kb on + strand, within asnS at 10.789 kb on + strand, within asnS at 10.797 kb on - strand, within asnS at 10.805 kb on + strand at 10.887 kb on + strand at 10.956 kb on - strand at 11.040 kb on + strand at 11.045 kb on - strand at 11.069 kb on - strand at 11.076 kb on - strand at 11.202 kb on - strand, within DVU0008 at 11.426 kb on + strand at 11.500 kb on - strand at 11.547 kb on - strand at 11.595 kb on + strand at 11.603 kb on - strand at 11.611 kb on + strand at 11.611 kb on + strand at 11.612 kb on - strand at 11.619 kb on - strand at 11.619 kb on - strand at 11.619 kb on - strand at 11.621 kb on + strand at 11.700 kb on + strand at 11.700 kb on + strand at 11.751 kb on + strand at 11.794 kb on - strand at 11.889 kb on - strand, within dctM at 11.977 kb on - strand, within dctM at 12.095 kb on - strand, within dctM at 12.096 kb on + strand, within dctM at 12.133 kb on - strand, within dctM at 12.214 kb on + strand, within dctM
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 10,115 + asnS DVU0007 0.41 +1.6 10,130 + asnS DVU0007 0.42 +0.5 10,138 - asnS DVU0007 0.42 -1.3 10,269 + asnS DVU0007 0.52 -1.9 10,269 + asnS DVU0007 0.52 -0.2 10,269 + asnS DVU0007 0.52 +0.2 10,269 + asnS DVU0007 0.52 -1.9 10,269 + asnS DVU0007 0.52 -1.8 10,270 + asnS DVU0007 0.52 -0.1 10,270 + asnS DVU0007 0.52 -0.7 10,277 - asnS DVU0007 0.52 -2.7 10,277 - asnS DVU0007 0.52 +0.6 10,277 - asnS DVU0007 0.52 +0.3 10,278 - asnS DVU0007 0.52 +0.6 10,278 - asnS DVU0007 0.52 +0.3 10,278 - asnS DVU0007 0.52 -1.6 10,278 - asnS DVU0007 0.52 -1.6 10,306 + asnS DVU0007 0.54 +1.6 10,314 - asnS DVU0007 0.55 +0.2 10,314 - asnS DVU0007 0.55 -0.5 10,316 + asnS DVU0007 0.55 +0.0 10,325 + asnS DVU0007 0.56 -0.2 10,382 + asnS DVU0007 0.60 -0.4 10,390 - asnS DVU0007 0.60 -0.1 10,422 + asnS DVU0007 0.63 +0.4 10,443 + asnS DVU0007 0.64 -0.2 10,443 - asnS DVU0007 0.64 -0.4 10,574 + asnS DVU0007 0.74 -0.1 10,576 + asnS DVU0007 0.74 +0.2 10,582 - asnS DVU0007 0.74 +1.3 10,608 - asnS DVU0007 0.76 -0.4 10,629 - asnS DVU0007 0.78 +0.1 10,629 - asnS DVU0007 0.78 -0.7 10,660 - asnS DVU0007 0.80 -0.9 10,714 + asnS DVU0007 0.84 -0.8 10,714 + asnS DVU0007 0.84 -2.6 10,738 + asnS DVU0007 0.86 +0.5 10,747 + asnS DVU0007 0.86 +0.3 10,789 + asnS DVU0007 0.89 -0.1 10,797 - asnS DVU0007 0.90 -1.2 10,805 + +0.6 10,887 + -0.5 10,956 - -0.1 11,040 + -0.1 11,045 - -0.1 11,069 - -0.2 11,076 - -0.4 11,202 - DVU0008 0.85 +0.9 11,426 + +0.7 11,500 - -0.3 11,547 - +0.1 11,595 + +0.2 11,603 - -0.2 11,611 + -0.2 11,611 + +0.2 11,612 - +0.0 11,619 - -2.7 11,619 - -1.4 11,619 - +0.0 11,621 + -0.1 11,700 + -0.0 11,700 + -0.3 11,751 + -0.2 11,794 - -1.0 11,889 - dctM DVU0009 0.16 -0.3 11,977 - dctM DVU0009 0.23 -0.6 12,095 - dctM DVU0009 0.32 -0.2 12,096 + dctM DVU0009 0.32 -0.5 12,133 - dctM DVU0009 0.35 -0.4 12,214 + dctM DVU0009 0.42 -0.4
Or see this region's nucleotide sequence