Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2876 and DVU2877 are separated by 91 nucleotides DVU2877 and DVU2878 overlap by 8 nucleotides
DVU2876: DVU2876 - terminase, large subunit, putative (TIGR), at 2,969,464 to 2,971,350
DVU2876
DVU2877: DVU2877 - hypothetical protein (TIGR), at 2,971,442 to 2,972,164
DVU2877
DVU2878: DVU2878 - adenine specific DNA methyltransferase, putative (TIGR), at 2,972,157 to 2,973,515
DVU2878
Position (kb)
2971
2972
2973 Strain fitness (log2 ratio)
-2
-1
0
1 at 2970.451 kb on - strand, within DVU2876 at 2970.630 kb on + strand, within DVU2876 at 2970.637 kb on + strand, within DVU2876 at 2970.665 kb on + strand, within DVU2876 at 2970.678 kb on - strand, within DVU2876 at 2970.681 kb on + strand, within DVU2876 at 2970.788 kb on - strand, within DVU2876 at 2970.833 kb on + strand, within DVU2876 at 2970.843 kb on + strand, within DVU2876 at 2970.889 kb on - strand, within DVU2876 at 2970.907 kb on - strand, within DVU2876 at 2970.958 kb on + strand, within DVU2876 at 2970.978 kb on + strand, within DVU2876 at 2971.058 kb on + strand, within DVU2876 at 2971.064 kb on + strand, within DVU2876 at 2971.464 kb on + strand at 2971.464 kb on + strand at 2971.472 kb on - strand at 2971.472 kb on - strand at 2971.591 kb on + strand, within DVU2877 at 2971.596 kb on + strand, within DVU2877 at 2971.816 kb on + strand, within DVU2877 at 2971.816 kb on + strand, within DVU2877 at 2971.824 kb on - strand, within DVU2877 at 2971.892 kb on - strand, within DVU2877 at 2971.892 kb on - strand, within DVU2877 at 2971.896 kb on + strand, within DVU2877 at 2971.903 kb on - strand, within DVU2877 at 2972.284 kb on - strand at 2972.694 kb on + strand, within DVU2878 at 2972.847 kb on + strand, within DVU2878 at 2973.051 kb on + strand, within DVU2878 at 2973.080 kb on - strand, within DVU2878
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 2,970,451 - DVU2876 0.52 -0.1 2,970,630 + DVU2876 0.62 -1.0 2,970,637 + DVU2876 0.62 +1.1 2,970,665 + DVU2876 0.64 -0.2 2,970,678 - DVU2876 0.64 -0.3 2,970,681 + DVU2876 0.64 -0.1 2,970,788 - DVU2876 0.70 -0.7 2,970,833 + DVU2876 0.73 +0.3 2,970,843 + DVU2876 0.73 -0.9 2,970,889 - DVU2876 0.76 +0.2 2,970,907 - DVU2876 0.76 +0.2 2,970,958 + DVU2876 0.79 -0.9 2,970,978 + DVU2876 0.80 -0.9 2,971,058 + DVU2876 0.84 -0.1 2,971,064 + DVU2876 0.85 +0.1 2,971,464 + -0.0 2,971,464 + -0.2 2,971,472 - -0.2 2,971,472 - -0.1 2,971,591 + DVU2877 0.21 +0.7 2,971,596 + DVU2877 0.21 +0.5 2,971,816 + DVU2877 0.52 +0.5 2,971,816 + DVU2877 0.52 +0.4 2,971,824 - DVU2877 0.53 -0.7 2,971,892 - DVU2877 0.62 +0.3 2,971,892 - DVU2877 0.62 +0.1 2,971,896 + DVU2877 0.63 -1.8 2,971,903 - DVU2877 0.64 +0.2 2,972,284 - +0.8 2,972,694 + DVU2878 0.40 +0.8 2,972,847 + DVU2878 0.51 +0.4 2,973,051 + DVU2878 0.66 -0.0 2,973,080 - DVU2878 0.68 -1.1
Or see this region's nucleotide sequence