Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2723 and DVU2724 overlap by 4 nucleotides DVU2724 and DVU2725 overlap by 62 nucleotides DVU2725 and DVU2727 are separated by 171 nucleotides DVU2727 and DVU2728 are separated by 9 nucleotides
DVU2723: DVU2723 - tail protein, putative (TIGR), at 2,827,365 to 2,828,489
DVU2723
DVU2724: DVU2724 - phage baseplate assembly protein V, putative (TIGR), at 2,828,486 to 2,829,112
DVU2724
DVU2725: DVU2725 - membrane protein, putative (TIGR), at 2,829,051 to 2,829,401
DVU2725
DVU2727: DVU2727 - conserved hypothetical protein (TIGR), at 2,829,573 to 2,829,929
DVU2727
DVU2728: DVU2728 - tail protein, putative (TIGR), at 2,829,939 to 2,831,000
DVU2728
Position (kb)
2829
2830 Strain fitness (log2 ratio)
-2
-1
0
1 at 2828.077 kb on - strand, within DVU2723 at 2828.079 kb on - strand, within DVU2723 at 2828.107 kb on - strand, within DVU2723 at 2828.130 kb on + strand, within DVU2723 at 2828.217 kb on - strand, within DVU2723 at 2828.258 kb on + strand, within DVU2723 at 2828.310 kb on - strand, within DVU2723 at 2828.388 kb on - strand at 2828.392 kb on + strand at 2828.415 kb on - strand at 2828.416 kb on + strand at 2828.628 kb on + strand, within DVU2724 at 2828.628 kb on + strand, within DVU2724 at 2828.647 kb on + strand, within DVU2724 at 2828.658 kb on + strand, within DVU2724 at 2828.666 kb on - strand, within DVU2724 at 2828.683 kb on + strand, within DVU2724 at 2828.691 kb on - strand, within DVU2724 at 2828.729 kb on - strand, within DVU2724 at 2828.814 kb on + strand, within DVU2724 at 2828.920 kb on + strand, within DVU2724 at 2829.128 kb on + strand, within DVU2725 at 2829.596 kb on - strand at 2829.641 kb on - strand, within DVU2727 at 2829.670 kb on - strand, within DVU2727 at 2829.730 kb on + strand, within DVU2727 at 2829.774 kb on + strand, within DVU2727 at 2829.782 kb on - strand, within DVU2727 at 2829.907 kb on - strand at 2829.907 kb on - strand at 2829.907 kb on - strand at 2829.909 kb on + strand at 2829.917 kb on - strand at 2829.932 kb on - strand at 2829.932 kb on - strand at 2829.959 kb on - strand at 2829.993 kb on + strand at 2830.023 kb on + strand at 2830.031 kb on + strand at 2830.080 kb on - strand, within DVU2728 at 2830.091 kb on - strand, within DVU2728 at 2830.102 kb on - strand, within DVU2728 at 2830.102 kb on - strand, within DVU2728 at 2830.158 kb on + strand, within DVU2728 at 2830.158 kb on + strand, within DVU2728 at 2830.166 kb on - strand, within DVU2728 at 2830.212 kb on - strand, within DVU2728 at 2830.297 kb on + strand, within DVU2728 at 2830.305 kb on - strand, within DVU2728
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 2,828,077 - DVU2723 0.63 -1.1 2,828,079 - DVU2723 0.63 -0.0 2,828,107 - DVU2723 0.66 -0.3 2,828,130 + DVU2723 0.68 +0.1 2,828,217 - DVU2723 0.76 -0.2 2,828,258 + DVU2723 0.79 -0.3 2,828,310 - DVU2723 0.84 -0.0 2,828,388 - -1.7 2,828,392 + +0.8 2,828,415 - +0.8 2,828,416 + +0.1 2,828,628 + DVU2724 0.23 -0.1 2,828,628 + DVU2724 0.23 -0.9 2,828,647 + DVU2724 0.26 -1.2 2,828,658 + DVU2724 0.27 -0.2 2,828,666 - DVU2724 0.29 +0.2 2,828,683 + DVU2724 0.31 -0.2 2,828,691 - DVU2724 0.33 -0.0 2,828,729 - DVU2724 0.39 -2.5 2,828,814 + DVU2724 0.52 -0.2 2,828,920 + DVU2724 0.69 +0.1 2,829,128 + DVU2725 0.22 -1.9 2,829,596 - +0.2 2,829,641 - DVU2727 0.19 -0.2 2,829,670 - DVU2727 0.27 -1.7 2,829,730 + DVU2727 0.44 -0.6 2,829,774 + DVU2727 0.56 -0.1 2,829,782 - DVU2727 0.59 -1.1 2,829,907 - -0.4 2,829,907 - -0.5 2,829,907 - +0.1 2,829,909 + -0.3 2,829,917 - -0.4 2,829,932 - +0.0 2,829,932 - -0.2 2,829,959 - +0.0 2,829,993 + -0.1 2,830,023 + +0.4 2,830,031 + -0.5 2,830,080 - DVU2728 0.13 -0.8 2,830,091 - DVU2728 0.14 +0.6 2,830,102 - DVU2728 0.15 +0.0 2,830,102 - DVU2728 0.15 -1.0 2,830,158 + DVU2728 0.21 -0.9 2,830,158 + DVU2728 0.21 -0.4 2,830,166 - DVU2728 0.21 -0.3 2,830,212 - DVU2728 0.26 -0.1 2,830,297 + DVU2728 0.34 -0.2 2,830,305 - DVU2728 0.34 -0.9
Or see this region's nucleotide sequence