Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2706 and DVU2707 are separated by 2 nucleotides DVU2707 and DVU2708 are separated by 164 nucleotides DVU2708 and DORF43335 are separated by 134 nucleotides
DVU2706: DVU2706 - conserved hypothetical protein (TIGR), at 2,812,507 to 2,814,225
DVU2706
DVU2707: DVU2707 - virion morphogenesis protein (TIGR), at 2,814,228 to 2,815,478
DVU2707
DVU2708: DVU2708 - virion morphogenesis protein (TIGR), at 2,815,643 to 2,816,131
DVU2708
DORF43335: DORF43335 - no description, at 2,816,266 to 2,816,802
DORF43335
Position (kb)
2814
2815
2816 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2813.245 kb on + strand, within DVU2706 at 2813.277 kb on - strand, within DVU2706 at 2813.279 kb on + strand, within DVU2706 at 2813.304 kb on - strand, within DVU2706 at 2813.305 kb on - strand, within DVU2706 at 2813.328 kb on - strand, within DVU2706 at 2813.380 kb on + strand, within DVU2706 at 2813.418 kb on + strand, within DVU2706 at 2813.455 kb on + strand, within DVU2706 at 2813.567 kb on - strand, within DVU2706 at 2813.569 kb on + strand, within DVU2706 at 2813.577 kb on - strand, within DVU2706 at 2813.650 kb on + strand, within DVU2706 at 2813.650 kb on + strand, within DVU2706 at 2813.658 kb on + strand, within DVU2706 at 2813.658 kb on - strand, within DVU2706 at 2813.764 kb on - strand, within DVU2706 at 2813.839 kb on + strand, within DVU2706 at 2813.850 kb on + strand, within DVU2706 at 2813.919 kb on + strand, within DVU2706 at 2814.029 kb on - strand, within DVU2706 at 2814.126 kb on + strand at 2814.132 kb on - strand at 2814.193 kb on + strand at 2814.193 kb on + strand at 2814.193 kb on + strand at 2814.193 kb on + strand at 2814.201 kb on - strand at 2814.201 kb on - strand at 2814.237 kb on - strand at 2814.256 kb on - strand at 2814.268 kb on + strand at 2814.302 kb on + strand at 2814.345 kb on + strand at 2814.436 kb on - strand, within DVU2707 at 2814.449 kb on - strand, within DVU2707 at 2814.488 kb on + strand, within DVU2707 at 2814.497 kb on + strand, within DVU2707 at 2814.561 kb on - strand, within DVU2707 at 2814.667 kb on - strand, within DVU2707 at 2814.702 kb on + strand, within DVU2707 at 2814.737 kb on + strand, within DVU2707 at 2814.781 kb on + strand, within DVU2707 at 2814.873 kb on + strand, within DVU2707 at 2814.960 kb on + strand, within DVU2707 at 2814.988 kb on - strand, within DVU2707 at 2814.998 kb on + strand, within DVU2707 at 2815.084 kb on - strand, within DVU2707 at 2815.084 kb on - strand, within DVU2707 at 2815.104 kb on - strand, within DVU2707 at 2815.106 kb on + strand, within DVU2707 at 2815.145 kb on - strand, within DVU2707 at 2815.176 kb on - strand, within DVU2707 at 2815.205 kb on - strand, within DVU2707 at 2815.236 kb on - strand, within DVU2707 at 2815.288 kb on - strand, within DVU2707 at 2815.347 kb on - strand, within DVU2707 at 2815.372 kb on + strand at 2815.410 kb on - strand at 2815.574 kb on + strand at 2815.574 kb on + strand at 2815.665 kb on - strand at 2815.665 kb on - strand at 2815.690 kb on - strand at 2815.721 kb on + strand, within DVU2708 at 2815.727 kb on - strand, within DVU2708 at 2815.728 kb on + strand, within DVU2708 at 2815.735 kb on - strand, within DVU2708 at 2815.781 kb on - strand, within DVU2708 at 2815.871 kb on - strand, within DVU2708 at 2815.877 kb on - strand, within DVU2708 at 2815.882 kb on + strand, within DVU2708 at 2815.884 kb on - strand, within DVU2708 at 2815.956 kb on - strand, within DVU2708 at 2815.957 kb on - strand, within DVU2708 at 2815.964 kb on + strand, within DVU2708 at 2815.969 kb on + strand, within DVU2708 at 2815.977 kb on - strand, within DVU2708 at 2815.977 kb on - strand, within DVU2708 at 2816.081 kb on + strand, within DVU2708 at 2816.126 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 2,813,245 + DVU2706 0.43 -0.2 2,813,277 - DVU2706 0.45 -0.5 2,813,279 + DVU2706 0.45 -0.3 2,813,304 - DVU2706 0.46 +0.3 2,813,305 - DVU2706 0.46 -1.0 2,813,328 - DVU2706 0.48 -0.7 2,813,380 + DVU2706 0.51 -0.1 2,813,418 + DVU2706 0.53 -0.1 2,813,455 + DVU2706 0.55 +0.0 2,813,567 - DVU2706 0.62 +0.5 2,813,569 + DVU2706 0.62 +0.1 2,813,577 - DVU2706 0.62 -2.8 2,813,650 + DVU2706 0.66 -0.8 2,813,650 + DVU2706 0.66 +0.3 2,813,658 + DVU2706 0.67 -0.1 2,813,658 - DVU2706 0.67 +0.6 2,813,764 - DVU2706 0.73 +1.2 2,813,839 + DVU2706 0.77 +0.1 2,813,850 + DVU2706 0.78 +0.3 2,813,919 + DVU2706 0.82 -0.5 2,814,029 - DVU2706 0.89 -0.9 2,814,126 + -1.0 2,814,132 - +0.0 2,814,193 + -0.2 2,814,193 + -0.6 2,814,193 + -2.1 2,814,193 + +0.1 2,814,201 - -0.3 2,814,201 - -0.5 2,814,237 - -0.8 2,814,256 - +0.3 2,814,268 + -2.0 2,814,302 + -0.2 2,814,345 + -1.1 2,814,436 - DVU2707 0.17 +0.2 2,814,449 - DVU2707 0.18 -1.3 2,814,488 + DVU2707 0.21 +0.5 2,814,497 + DVU2707 0.22 -0.8 2,814,561 - DVU2707 0.27 -1.2 2,814,667 - DVU2707 0.35 -1.0 2,814,702 + DVU2707 0.38 +0.0 2,814,737 + DVU2707 0.41 -1.3 2,814,781 + DVU2707 0.44 -0.1 2,814,873 + DVU2707 0.52 -0.5 2,814,960 + DVU2707 0.59 -0.2 2,814,988 - DVU2707 0.61 +0.0 2,814,998 + DVU2707 0.62 -0.4 2,815,084 - DVU2707 0.68 +0.5 2,815,084 - DVU2707 0.68 -0.1 2,815,104 - DVU2707 0.70 -1.7 2,815,106 + DVU2707 0.70 +0.1 2,815,145 - DVU2707 0.73 -1.5 2,815,176 - DVU2707 0.76 -1.6 2,815,205 - DVU2707 0.78 -1.0 2,815,236 - DVU2707 0.81 +0.2 2,815,288 - DVU2707 0.85 -0.1 2,815,347 - DVU2707 0.89 +1.6 2,815,372 + -0.7 2,815,410 - +0.1 2,815,574 + +0.0 2,815,574 + -0.8 2,815,665 - -0.8 2,815,665 - +0.3 2,815,690 - -0.2 2,815,721 + DVU2708 0.16 -1.8 2,815,727 - DVU2708 0.17 +0.3 2,815,728 + DVU2708 0.17 +0.5 2,815,735 - DVU2708 0.19 -0.3 2,815,781 - DVU2708 0.28 -1.5 2,815,871 - DVU2708 0.47 +0.0 2,815,877 - DVU2708 0.48 -0.3 2,815,882 + DVU2708 0.49 +0.5 2,815,884 - DVU2708 0.49 -1.4 2,815,956 - DVU2708 0.64 +0.6 2,815,957 - DVU2708 0.64 +0.3 2,815,964 + DVU2708 0.66 -0.7 2,815,969 + DVU2708 0.67 +0.8 2,815,977 - DVU2708 0.68 -0.6 2,815,977 - DVU2708 0.68 -0.3 2,816,081 + DVU2708 0.90 +0.0 2,816,126 + +0.1
Or see this region's nucleotide sequence