Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2446

Experiment: MoLS4 without vitamins with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.2%
2,549,523	-	flaB3	DVU2444	0.18	+0.5
2,549,762	-	flaB3	DVU2444	0.45	-0.3
2,549,836	+	flaB3	DVU2444	0.53	-0.0
2,549,846	+	flaB3	DVU2444	0.54	+0.1
2,549,947	-	flaB3	DVU2444	0.66	+0.1
2,550,064	+	flaB3	DVU2444	0.79	-0.0
2,550,175	+				-0.3
2,550,180	-				+0.1
2,550,360	-				-1.8
2,550,370	-				-0.8
2,550,376	+				-0.1
2,550,497	-				-1.1
2,550,513	-				-0.0
2,550,533	+				-1.0
2,550,561	+				-0.6
2,550,562	+				-0.2
2,550,570	-				-0.6
2,550,570	-				-0.3
2,550,571	-				-0.5
2,550,604	-				-0.9
2,550,630	+	panB	DVU2446	0.13	-0.6
2,550,638	-	panB	DVU2446	0.14	-1.1
2,550,782	-	panB	DVU2446	0.29	-2.6
2,550,804	-	panB	DVU2446	0.31	-1.6
2,550,809	-	panB	DVU2446	0.32	-0.2
2,550,850	-	panB	DVU2446	0.36	-0.4
2,550,852	+	panB	DVU2446	0.37	-0.5
2,550,854	+	panB	DVU2446	0.37	+0.2
2,550,854	+	panB	DVU2446	0.37	-0.7
2,550,860	-	panB	DVU2446	0.38	-0.5
2,550,862	-	panB	DVU2446	0.38	-0.2
2,550,862	-	panB	DVU2446	0.38	-0.4
2,550,862	-	panB	DVU2446	0.38	-0.3
2,550,862	-	panB	DVU2446	0.38	-0.1
2,550,940	-	panB	DVU2446	0.46	-1.6
2,551,020	+	panB	DVU2446	0.55	-0.4
2,551,103	+	panB	DVU2446	0.64	+0.2
2,551,219	+	panB	DVU2446	0.76	-0.5
2,551,254	+	panB	DVU2446	0.80	-0.3
2,551,334	-	panB	DVU2446	0.89	-0.3
2,551,533	+				-0.2
2,551,572	+				-0.0
2,551,572	+				+0.0
2,551,572	+				-0.5
2,551,580	-				-1.5
2,551,584	-				+0.1
2,551,730	-		DVU2447	0.30	+0.1
2,551,732	-		DVU2447	0.31	-0.1
2,551,782	+		DVU2447	0.39	+0.4
2,551,813	-		DVU2447	0.45	-1.6
2,551,875	-		DVU2447	0.56	-0.4
2,551,921	+		DVU2447	0.64	-1.7
2,551,929	-		DVU2447	0.65	+0.1
2,551,983	-		DVU2447	0.74	-1.0
2,552,012	-		DVU2447	0.79	+0.4
2,552,051	-		DVU2447	0.86	-0.6
2,552,077	-				-1.1
2,552,090	+				-0.4
2,552,095	+				-0.0
2,552,150	+				-1.2
2,552,169	+				+0.1
2,552,205	-				-0.9
2,552,207	+				+0.0
2,552,215	-				-0.1
2,552,222	-				-0.3
2,552,222	-				-0.2
2,552,241	-				-0.9
2,552,243	-				-0.4
2,552,243	-				-1.7
2,552,243	-				-0.4
2,552,253	-				+0.2
2,552,408	+	panC	DVU2448	0.12	-1.7
2,552,416	-	panC	DVU2448	0.13	-2.7
2,552,416	-	panC	DVU2448	0.13	-1.4
2,552,416	-	panC	DVU2448	0.13	-0.3
2,552,416	-	panC	DVU2448	0.13	-1.6
2,552,431	+	panC	DVU2448	0.15	-1.5
2,552,434	-	panC	DVU2448	0.15	-1.2