Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2385

Experiment: MoLS4 without vitamins with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.2%
2,486,052	+		DVU2384	0.49	-0.2
2,486,057	+		DVU2384	0.49	+0.4
2,486,177	+		DVU2384	0.56	-1.5
2,486,204	-		DVU2384	0.57	-0.1
2,486,361	-		DVU2384	0.65	-0.5
2,486,403	-		DVU2384	0.67	-1.4
2,486,439	+		DVU2384	0.69	-0.9
2,486,454	+		DVU2384	0.70	+0.8
2,486,454	+		DVU2384	0.70	+0.7
2,486,472	+		DVU2384	0.71	+0.2
2,486,480	-		DVU2384	0.71	-0.1
2,486,533	+		DVU2384	0.74	+0.7
2,486,571	-		DVU2384	0.76	-1.9
2,486,679	-		DVU2384	0.82	-0.1
2,486,727	+		DVU2384	0.84	-0.5
2,486,752	+		DVU2384	0.86	-0.2
2,486,791	-		DVU2384	0.88	+0.1
2,486,804	+		DVU2384	0.88	-0.5
2,486,878	+				-0.1
2,486,942	+				-0.1
2,486,942	+				-0.3
2,486,942	+				+0.4
2,486,942	+				-1.1
2,486,942	+				-0.1
2,486,942	+				-0.0
2,486,942	+				-0.6
2,486,942	+				+0.3
2,486,950	-				-2.0
2,486,950	-				-0.3
2,486,950	-				-0.0
2,486,950	-				+0.3
2,486,970	-				+0.2
2,486,974	-				-0.8
2,487,072	-				-0.1
2,487,074	-				-0.3
2,487,169	+		DVU2385	0.12	-0.6
2,487,177	-		DVU2385	0.13	-1.5
2,487,212	-		DVU2385	0.16	-0.0
2,487,290	-		DVU2385	0.23	-0.2
2,487,348	-		DVU2385	0.28	-0.4
2,487,383	-		DVU2385	0.32	+0.5
2,487,385	+		DVU2385	0.32	-1.0
2,487,393	-		DVU2385	0.32	-2.1
2,487,428	-		DVU2385	0.36	-0.1
2,487,578	+		DVU2385	0.49	-1.3
2,487,729	+		DVU2385	0.62	+0.2
2,487,737	-		DVU2385	0.63	-0.6
2,487,841	+		DVU2385	0.72	-1.3
2,487,883	-		DVU2385	0.76	-1.1
2,487,899	-		DVU2385	0.78	-0.9
2,487,904	+		DVU2385	0.78	-1.0
2,487,938	-		DVU2385	0.81	-0.0
2,487,995	+		DVU2385	0.86	-1.0
2,488,013	+		DVU2385	0.88	-0.1
2,488,024	+		DVU2385	0.89	-0.2
2,488,049	+				-1.0
2,488,049	+				-0.5
2,488,085	-				+0.3
2,488,217	+				+0.2
2,488,271	-	oppC	DVU2386	0.12	-0.0
2,488,285	+	oppC	DVU2386	0.13	+1.1
2,488,285	+	oppC	DVU2386	0.13	-0.4
2,488,304	+	oppC	DVU2386	0.15	-0.3
2,488,361	-	oppC	DVU2386	0.21	-0.1
2,488,373	+	oppC	DVU2386	0.22	+0.2
2,488,414	+	oppC	DVU2386	0.26	-0.3
2,488,502	+	oppC	DVU2386	0.34	-0.1
2,488,547	+	oppC	DVU2386	0.39	+0.2
2,488,576	+	oppC	DVU2386	0.42	-0.2
2,488,577	+	oppC	DVU2386	0.42	-0.1
2,488,591	-	oppC	DVU2386	0.43	-0.3
2,488,591	-	oppC	DVU2386	0.43	+1.1
2,488,591	-	oppC	DVU2386	0.43	+0.2
2,488,594	-	oppC	DVU2386	0.43	+0.5
2,488,621	+	oppC	DVU2386	0.46	-0.2
2,488,629	-	oppC	DVU2386	0.47	-0.5
2,488,742	+	oppC	DVU2386	0.58	-0.2
2,488,750	-	oppC	DVU2386	0.58	+0.3
2,488,754	+	oppC	DVU2386	0.59	-0.8
2,488,818	+	oppC	DVU2386	0.65	-0.9
2,488,850	+	oppC	DVU2386	0.68	+0.4
2,488,850	+	oppC	DVU2386	0.68	-0.1
2,488,891	-	oppC	DVU2386	0.72	-0.3
2,488,901	-	oppC	DVU2386	0.73	-0.0
2,489,001	+	oppC	DVU2386	0.83	+0.0
2,489,040	+	oppC	DVU2386	0.87	-0.7
2,489,040	+	oppC	DVU2386	0.87	-1.8
2,489,087	-				-0.3
2,489,089	+				-0.4
2,489,090	+				+0.1
2,489,114	+				+0.1