Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2305
Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without vitamins with Casaminos 0.2% |
---|---|---|---|---|---|
remove | |||||
2,397,952 | - | DVU2303 | 0.85 | -0.1 | |
2,397,952 | - | DVU2303 | 0.85 | -0.9 | |
2,397,964 | - | DVU2303 | 0.86 | -0.3 | |
2,398,168 | + | -0.9 | |||
2,398,264 | - | -0.3 | |||
2,398,276 | - | -0.7 | |||
2,398,378 | - | +1.0 | |||
2,398,385 | + | +1.1 | |||
2,398,720 | + | DVU2305 | 0.37 | +0.4 | |
2,398,729 | + | DVU2305 | 0.38 | -1.2 | |
2,398,737 | - | DVU2305 | 0.39 | -1.7 | |
2,398,848 | - | DVU2305 | 0.57 | -1.5 | |
2,399,112 | - | -1.8 | |||
2,399,181 | + | -0.8 | |||
2,399,193 | + | -0.7 | |||
2,399,248 | - | DVU2306 | 0.13 | -0.4 | |
2,399,348 | - | DVU2306 | 0.23 | -1.9 | |
2,399,348 | - | DVU2306 | 0.23 | -0.6 | |
2,399,348 | - | DVU2306 | 0.23 | -0.0 | |
2,399,416 | - | DVU2306 | 0.30 | -1.9 | |
2,399,456 | + | DVU2306 | 0.34 | +1.0 | |
2,399,461 | - | DVU2306 | 0.35 | +0.5 | |
2,399,481 | + | DVU2306 | 0.36 | -2.6 | |
2,399,484 | - | DVU2306 | 0.37 | -2.6 | |
2,399,800 | - | DVU2306 | 0.68 | -0.6 |
Or see this region's nucleotide sequence