Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2198
Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without vitamins with Casaminos 0.2% |
---|---|---|---|---|---|
remove | |||||
2,293,233 | - | DVU2197 | 0.50 | -0.2 | |
2,293,238 | - | DVU2197 | 0.51 | -0.4 | |
2,293,265 | + | DVU2197 | 0.54 | -0.4 | |
2,293,365 | - | DVU2197 | 0.65 | -0.9 | |
2,293,394 | - | DVU2197 | 0.68 | -0.3 | |
2,293,408 | + | DVU2197 | 0.69 | -1.0 | |
2,293,425 | - | DVU2197 | 0.71 | +0.1 | |
2,293,426 | + | DVU2197 | 0.71 | +0.1 | |
2,293,440 | + | DVU2197 | 0.73 | +0.1 | |
2,293,485 | + | DVU2197 | 0.78 | -0.9 | |
2,293,485 | + | DVU2197 | 0.78 | -0.6 | |
2,293,485 | + | DVU2197 | 0.78 | -1.4 | |
2,293,493 | - | DVU2197 | 0.78 | -1.0 | |
2,293,554 | + | DVU2197 | 0.85 | -0.3 | |
2,293,562 | - | DVU2197 | 0.86 | +0.3 | |
2,293,595 | - | DVU2197 | 0.89 | -0.4 | |
2,293,661 | + | +0.2 | |||
2,293,689 | - | -0.1 | |||
2,293,697 | - | -0.1 | |||
2,293,771 | - | -0.1 | |||
2,293,773 | - | -0.2 | |||
2,293,778 | - | -0.2 | |||
2,293,835 | - | -0.4 | |||
2,294,158 | + | -0.2 | |||
2,294,206 | - | -1.3 | |||
2,294,237 | - | -0.5 | |||
2,294,344 | + | DVU2198 | 0.64 | -1.4 | |
2,294,775 | - | -0.4 | |||
2,294,828 | + | -0.2 | |||
2,294,871 | + | DVU2200 | 0.15 | -1.0 | |
2,294,943 | - | DVU2200 | 0.34 | +0.2 | |
2,295,194 | + | -2.6 | |||
2,295,279 | - | -0.5 | |||
2,295,296 | - | -2.4 | |||
2,295,347 | - | +0.1 | |||
2,295,347 | - | -0.3 | |||
2,295,372 | - | +0.2 |
Or see this region's nucleotide sequence